RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 CLIC4Q9Y696 253 aa14.66□□□□□ -0.06
VAT1L-201ENST00000302536 FDPSP14324 419 aaKnown RBP14.66□□□□□ -0.06
VAT1L-201ENST00000302536 ARID4AP29374 1257 aaPredicted RBP14.66□□□□□ -0.06
VAT1L-201ENST00000302536 NAP1L1P55209 391 aaKnown RBP14.66□□□□□ -0.06
VAT1L-201ENST00000302536 RESTQ13127 1097 aa14.66□□□□□ -0.06
VAT1L-201ENST00000302536 ARFGAP3Q9NP61 516 aa14.66□□□□□ -0.06
VAT1L-201ENST00000302536 MCM9Q9NXL9 1143 aa14.66□□□□□ -0.06
VAT1L-201ENST00000302536 LCMT1Q9UIC8 334 aa14.66□□□□□ -0.06
VAT1L-201ENST00000302536 JCADQ9P266 1359 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 LRRN4CLQ8ND94 238 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 UFL1O94874 794 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 SLC3A2P08195 630 aaKnown RBP14.65□□□□□ -0.06
VAT1L-201ENST00000302536 PNMA6AP0CW24 399 aaPredicted RBP14.65□□□□□ -0.06
VAT1L-201ENST00000302536 MNAT1P51948 309 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 APOA5Q6Q788 366 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 AKNAD1Q5T1N1 836 aa14.65□□□□□ -0.06
VAT1L-201ENST00000302536 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
VAT1L-201ENST00000302536 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 CYP2C19P33261 490 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 LRRC8AQ8IWT6 810 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
VAT1L-201ENST00000302536 MATR3P43243 847 aaKnown RBP eCLIP14.64□□□□□ -0.07
VAT1L-201ENST00000302536 UBASH3AP57075 661 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 C11orf57Q6ZUT1 292 aaPredicted RBP14.64□□□□□ -0.07
VAT1L-201ENST00000302536 MICALL1Q8N3F8 863 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 NYXQ9GZU5 481 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 PPARAQ07869 468 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.64□□□□□ -0.07
VAT1L-201ENST00000302536 ZNF804BA4D1E1 1349 aa14.64□□□□□ -0.07
VAT1L-201ENST00000302536 SRCAPQ6ZRS2 3230 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 SETQ01105 290 aaPredicted RBP14.63□□□□□ -0.07
VAT1L-201ENST00000302536 MECOMQ03112 1051 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
VAT1L-201ENST00000302536 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 ATP2C2O75185 946 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 DESI2Q9BSY9 194 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 HPS5Q9UPZ3 1129 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 CRYBG1Q9Y4K1 1723 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 KIF28PB7ZC32 967 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 CLEC4GQ6UXB4 293 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 ZNF622Q969S3 477 aaKnown RBP eCLIP14.63□□□□□ -0.07
VAT1L-201ENST00000302536 DYNLL2Q96FJ2 89 aa14.63□□□□□ -0.07
VAT1L-201ENST00000302536 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
VAT1L-201ENST00000302536 USP17L8P0C7I0 530 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 PICALMQ13492 652 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
VAT1L-201ENST00000302536 MAPKAPK5Q8IW41 473 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 TSPY2A6NKD2 308 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 TPM1P09493 284 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 RTN1Q16799 776 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 KRT40Q6A162 431 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 SSRP1Q08945 709 aaKnown RBP14.62□□□□□ -0.07
VAT1L-201ENST00000302536 XPO4Q9C0E2 1151 aaKnown RBP14.62□□□□□ -0.07
VAT1L-201ENST00000302536 ZNF446Q9NWS9 450 aa14.62□□□□□ -0.07
VAT1L-201ENST00000302536 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
VAT1L-201ENST00000302536 SERPINB2P05120 415 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 STX17P56962 302 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 GRIK5Q16478 980 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 TSR1Q2NL82 804 aaKnown RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 CLIC6Q96NY7 704 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 RUFY1Q96T51 708 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 GLI3P10071 1580 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 SH2B2O14492 632 aaPredicted RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 APBA3O96018 575 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 CERKQ8TCT0 537 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 TGFBRAP1Q8WUH2 860 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 ZSCAN16Q9H4T2 348 aaPredicted RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 DOK7Q18PE1 504 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 TRIM22Q8IYM9 498 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 IL17RAQ96F46 866 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 PLCD4Q9BRC7 762 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 RRP15Q9Y3B9 282 aaKnown RBP14.61□□□□□ -0.07
VAT1L-201ENST00000302536 ITGB4P16144 1822 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 BCL9LQ86UU0 1499 aa14.61□□□□□ -0.07
VAT1L-201ENST00000302536 TNKSO95271 1327 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 UBE4AQ14139 1066 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 PPFIBP1Q86W92 1011 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 GOLPH3LQ9H4A5 285 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 VAT1LQ9HCJ6 419 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.6□□□□□ -0.07
VAT1L-201ENST00000302536 VPS54Q9P1Q0 977 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 COL14A1Q05707 1796 aaKnown RBP14.6□□□□□ -0.07
VAT1L-201ENST00000302536 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
VAT1L-201ENST00000302536 NR5A1Q13285 461 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 IFIT1BQ5T764 474 aaKnown RBP14.6□□□□□ -0.07
VAT1L-201ENST00000302536 WWC2Q6AWC2 1192 aa14.6□□□□□ -0.07
VAT1L-201ENST00000302536 ABCC6O95255 1503 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms