RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 NMT2O60551 498 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 KDM4AO75164 1064 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 TOMM70O94826 608 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 INPP5BP32019 993 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.24□□□□□ -0.61
RFX3-201ENST00000302303 CHST3Q7LGC8 479 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFX3-201ENST00000302303 TTC14Q96N46 770 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 NEK1Q96PY6 1258 aa11.24□□□□□ -0.61
RFX3-201ENST00000302303 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
RFX3-201ENST00000302303 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
RFX3-201ENST00000302303 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
RFX3-201ENST00000302303 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 CAP2P40123 477 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 TFAP4Q01664 338 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 PDE4BQ07343 736 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 SEC23AQ15436 765 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 CRACR2BQ8N4Y2 399 aaPredicted RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 TCEANC2Q96MN5 208 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
RFX3-201ENST00000302303 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
RFX3-201ENST00000302303 MCCP23508 829 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 PRKG1Q13976 671 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 KRT32Q14532 448 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
RFX3-201ENST00000302303 RUFY3Q7L099 469 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
RFX3-201ENST00000302303 CLEC10AQ8IUN9 316 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
RFX3-201ENST00000302303 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 ZNF341Q9BYN7 854 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 KRT23Q9C075 422 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
RFX3-201ENST00000302303 RANBP6O60518 1105 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 GDF11O95390 407 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 GH2P01242 217 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 SLC3A2P08195 630 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 RPS6KB1P23443 525 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 FBXL16Q8N461 479 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 ESR2Q92731 530 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 UPF2Q9HAU5 1272 aaKnown RBP11.21□□□□□ -0.61
RFX3-201ENST00000302303 SNCAIPQ9Y6H5 919 aa11.21□□□□□ -0.61
RFX3-201ENST00000302303 A0A1W2PRG0 241 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 UBE2Q2LH0YL09 131 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 PRC1O43663 620 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
RFX3-201ENST00000302303 VGLL4Q14135 290 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 SEPT2Q15019 361 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 ABCB5Q2M3G0 1257 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 NOL9Q5SY16 702 aaKnown RBP11.2□□□□□ -0.62
RFX3-201ENST00000302303 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 CLMNQ96JQ2 1002 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 WRNIP1Q96S55 665 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 LRRC2Q9BYS8 371 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
RFX3-201ENST00000302303 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 ZBTB21Q9ULJ3 1066 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
RFX3-201ENST00000302303 OTOFQ9HC10 1997 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
RFX3-201ENST00000302303 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 CELF2O95319 508 aaKnown RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 PSMA5P28066 241 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 MCM5P33992 734 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 NT5C2P49902 561 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 BLOC1S2Q6QNY1 142 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 SCYL3Q8IZE3 742 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 ENAHQ8N8S7 591 aaPredicted RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
RFX3-201ENST00000302303 SH2B2O14492 632 aaPredicted RBP11.19□□□□□ -0.62
RFX3-201ENST00000302303 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms