RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
ABCA3-201ENST00000301732 NOX5Q96PH1 765 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 AATFQ9NY61 560 aaKnown RBP eCLIP13.73□□□□□ -0.21
ABCA3-201ENST00000301732 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
ABCA3-201ENST00000301732 MAGEA1P43355 309 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 C4orf50Q6ZRC1 276 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 CEP128Q6ZU80 1094 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 PAK1Q13153 545 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 WDR44Q5JSH3 913 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
ABCA3-201ENST00000301732 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 KCNK3O14649 394 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 CETN3O15182 167 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 TSNAXIP1Q2TAA8 658 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 USP37Q86T82 979 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 ATICP31939 592 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 FIS1Q9Y3D6 152 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 PCDHB13Q9Y5F0 798 aa13.73□□□□□ -0.21
ABCA3-201ENST00000301732 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 KIAA1524Q8TCG1 905 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 LRRC45Q96CN5 670 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 STX10O60499 249 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SMYD2Q9NRG4 433 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 CD19P15391 556 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 GNL1P36915 607 aaPredicted RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 ZKSCAN8Q15776 578 aaPredicted RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 STX2P32856 288 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 ST5P78524 1137 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SPDL1Q96EA4 605 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SBNO1A3KN83 1393 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 ABCC11Q96J66 1382 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 RCN2Q14257 317 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 SCYL2Q6P3W7 929 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 PEX26Q7Z412 305 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 MYCT1Q8N699 235 aa13.72□□□□□ -0.21
ABCA3-201ENST00000301732 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
ABCA3-201ENST00000301732 TSTA3Q13630 321 aaPredicted RBP13.71□□□□□ -0.21
ABCA3-201ENST00000301732 DENND2CQ68D51 928 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 DBNDD2Q9BQY9 259 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 PYCARDQ9ULZ3 195 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 CXCR5P32302 372 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 TMTC2Q8N394 836 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 CLIC6Q96NY7 704 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 SWAP70Q9UH65 585 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 ABL1P00519 1130 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 CYP2J2P51589 502 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
ABCA3-201ENST00000301732 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.21
ABCA3-201ENST00000301732 ACTN4O43707 911 aaKnown RBP13.71□□□□□ -0.22
ABCA3-201ENST00000301732 SERPINB6P35237 376 aa13.71□□□□□ -0.22
ABCA3-201ENST00000301732 GSTO1P78417 241 aa13.71□□□□□ -0.22
ABCA3-201ENST00000301732 ZNF653Q96CK0 615 aa13.71□□□□□ -0.22
ABCA3-201ENST00000301732 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.22
ABCA3-201ENST00000301732 CCDC14Q49A88 953 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 ANKRD20A3Q5VUR7 823 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 SLC12A1Q13621 1099 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 RPAINQ86UA6 219 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 TRPC3Q13507 836 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
ABCA3-201ENST00000301732 INPP5FQ9Y2H2 1132 aa13.7□□□□□ -0.22
ABCA3-201ENST00000301732 RGS16O15492 202 aaPredicted RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 BMP15O95972 392 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
ABCA3-201ENST00000301732 POSTNQ15063 836 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 ABCF3Q9NUQ8 709 aa13.69□□□□□ -0.22
ABCA3-201ENST00000301732 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms