RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
CTDP1-202ENST00000299543 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
CTDP1-202ENST00000299543 POSTNQ15063 836 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 ZNF654Q8IZM8 581 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 HPSEQ9Y251 543 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 IKBKBO14920 756 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 MMP1P03956 469 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 IFNAR1P17181 557 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 LIFRP42702 1097 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 SGMS1Q86VZ5 419 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 HSD3B7Q9H2F3 369 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 TUBE1Q9UJT0 475 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 WDR19Q8NEZ3 1342 aa15.34■□□□□ 0.05
CTDP1-202ENST00000299543 BMP6P22004 513 aa15.34■□□□□ 0.05
CTDP1-202ENST00000299543 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
CTDP1-202ENST00000299543 V9GY48 417 aaPredicted RBP15.34■□□□□ 0.05
CTDP1-202ENST00000299543 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
CTDP1-202ENST00000299543 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
CTDP1-202ENST00000299543 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
CTDP1-202ENST00000299543 PSEN1P49768 467 aa15.33■□□□□ 0.05
CTDP1-202ENST00000299543 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.059e-6■■■■□ 20.6
CTDP1-202ENST00000299543 CHRNDQ07001 517 aa15.33■□□□□ 0.05
CTDP1-202ENST00000299543 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.05
CTDP1-202ENST00000299543 CSRNP2Q9H175 543 aa15.33■□□□□ 0.05
CTDP1-202ENST00000299543 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.05
CTDP1-202ENST00000299543 FGFR2P21802 821 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
CTDP1-202ENST00000299543 PPARAQ07869 468 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 ARHGAP29Q52LW3 1261 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 CRACR2BQ8N4Y2 399 aaPredicted RBP15.33■□□□□ 0.04
CTDP1-202ENST00000299543 ZNF174Q15697 407 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 FOXR1Q6PIV2 292 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 SMYD4Q8IYR2 804 aaPredicted RBP15.33■□□□□ 0.04
CTDP1-202ENST00000299543 EPSTI1Q96J88 318 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 DESI2Q9BSY9 194 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 TNKSO95271 1327 aa15.33■□□□□ 0.04
CTDP1-202ENST00000299543 CCDC196A0A1B0GTZ2 297 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 DEXIO95424 95 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 IL6STP40189 918 aaPredicted RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 GNG11P61952 73 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ZSCAN26Q16670 478 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 MAGEB6P1A0A0J9YX57 407 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ETF1P62495 437 aaKnown RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 UBXN4Q92575 508 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ZNF512BQ96KM6 892 aaPredicted RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ZSWIM4Q9H7M6 989 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 DCCP43146 1447 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 NWD2Q9ULI1 1742 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 TNS2Q63HR2 1409 aa15.32■□□□□ 0.04
CTDP1-202ENST00000299543 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
CTDP1-202ENST00000299543 TJP1Q07157 1748 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 PSDA5PKW4 1024 aaPredicted RBP15.31■□□□□ 0.04
CTDP1-202ENST00000299543 LMAN1P49257 510 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 ESR2Q92731 530 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 CARD6Q9BX69 1037 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
CTDP1-202ENST00000299543 GLI3P10071 1580 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 ALX1Q15699 326 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 BAG1Q99933 345 aaPredicted RBP15.31■□□□□ 0.04
CTDP1-202ENST00000299543 TSPYL1Q9H0U9 437 aa15.31■□□□□ 0.04
CTDP1-202ENST00000299543 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.31■□□□□ 0.04
CTDP1-202ENST00000299543 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 PTPREP23469 700 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 FBXO2Q9UK22 296 aaPredicted RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 TRIM75PA6NK02 468 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 SASH3O75995 380 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 PLEKHA8P1O95397 391 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 XBP1P17861 261 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 CASQ1P31415 396 aa15.3■□□□□ 0.04
CTDP1-202ENST00000299543 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 CT47A1Q5JQC4 288 aaPredicted RBP15.3■□□□□ 0.04
CTDP1-202ENST00000299543 VWA3AA6NCI4 1184 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 GNAT2P19087 354 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 EVX2Q03828 476 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 GPS2Q13227 327 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 PACS2Q86VP3 889 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 STAG1Q8WVM7 1258 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 INTS13Q9NVM9 706 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 NMT2O60551 498 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 H2AFXP16104 143 aaPredicted RBP15.29■□□□□ 0.04
CTDP1-202ENST00000299543 ICE2Q659A1 982 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms