RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 MRFAP1Q9Y605 127 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 SAR1BQ9Y6B6 198 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 PCNX2A6NKB5 2137 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 IPO5O00410 1097 aaKnown RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 CYTH3O43739 400 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 GNA14O95837 355 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 PRPF4BQ13523 1007 aaKnown RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 CCDC13Q8IYE1 715 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 NEK11Q8NG66 645 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 UBLCP1Q8WVY7 318 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 RPGRQ92834 1020 aaKnown RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 CNGB3Q9NQW8 809 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 IL1RAPL1Q9NZN1 696 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 BZW2Q9Y6E2 419 aaKnown RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 AREL1O15033 823 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 ADRM1Q16186 407 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 JPH2Q9BR39 696 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-201ENST00000297405 SSH2Q76I76 1423 aa5.35□□□□□ -1.55
CSMD3-201ENST00000297405 ZGRF1Q86YA3 2104 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 ENO4A6NNW6 628 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 IL9RQ01113 521 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 MYL5Q02045 173 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 ASPHQ12797 758 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 RCSD1Q6JBY9 416 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 EPS8L2Q9H6S3 715 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 A0A1B0GVL5 298 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 ERCC5P28715 1186 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SERPINB4P48594 390 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 PDE6CP51160 858 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 BRIP1Q9BX63 1249 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 DONSONQ9NYP3 566 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SCHIP1Q9P0W5 487 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 GNAQP50148 359 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 TCERG1LQ5VWI1 586 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SPTY2D1Q68D10 685 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SYBUQ9NX95 663 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 STRNO43815 780 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 PLIN1O60240 522 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 TTF1Q15361 905 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 TRAK1Q9UPV9 953 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 TBCAO75347 108 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 GCFC2P16383 781 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 MKRN3Q13064 507 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 NFE2L2Q16236 605 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 WNK1Q9H4A3 2382 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SURF6O75683 361 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 ST5P78524 1137 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SKOR1P84550 965 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 KLC1Q07866 573 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 NAP1L4Q99733 375 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 CNNM2Q9H8M5 875 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 GOLGA8IPA6NC78 632 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 EVI5LQ96CN4 794 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 CYTH2Q99418 400 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 MRPS26Q9BYN8 205 aaKnown RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 BLOC1S6Q9UL45 172 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 HYOU1Q9Y4L1 999 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 CATIPQ7Z7H3 387 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SLF2Q8IX21 1173 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 GRAMD1AQ96CP6 724 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 MTRQ99707 1265 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 SELENOSQ9BQE4 189 aa5.34□□□□□ -1.55
CSMD3-201ENST00000297405 PACSIN2Q9UNF0 486 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-201ENST00000297405 ADCY3O60266 1144 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 NECAB1Q8N987 351 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 BHMTQ93088 406 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 FAM81BQ96LP2 452 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 RTL1A6NKG5 1358 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 EXOC5O00471 708 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 TTI1O43156 1089 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 HSPA1LP34931 641 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 SEMA3FQ13275 785 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 LAMC2Q13753 1193 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 TERF2Q15554 542 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 ARHGAP45Q92619 1136 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 PPP1R14BQ96C90 147 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 FAM192AQ9GZU8 254 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 TMOD4Q9NZQ9 345 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 LCMT1Q9UIC8 334 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.34□□□□□ -1.56
CSMD3-201ENST00000297405 RAB15P59190 212 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 TMEM132AQ24JP5 1023 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 CROCCP3Q8IVE0 287 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 TBC1D22AQ8WUA7 517 aa5.34□□□□□ -1.56
CSMD3-201ENST00000297405 UPF3AQ9H1J1 476 aaKnown RBP5.34□□□□□ -1.56
CSMD3-201ENST00000297405 PYGBP11216 843 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 KIF11P52732 1056 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 GID8Q9NWU2 228 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 PYGLP06737 847 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 IDEP14735 1019 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 GUCY2CP25092 1073 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 CERS3Q8IU89 383 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 VPS37BQ9H9H4 285 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 KDM5DQ9BY66 1539 aa5.33□□□□□ -1.56
CSMD3-201ENST00000297405 TRPM6Q9BX84 2022 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms