RNA–Protein interactions for RNA: ENST00000296684.9

NDUFS4-201, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS4, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-201ENST00000296684 MAP3K7O43318 606 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 ADD2P35612 726 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 MIGA2Q7L4E1 593 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 SH3BP5LQ7L8J4 393 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 KBTBD3Q8NAB2 608 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 WNK4Q96J92 1243 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
NDUFS4-201ENST00000296684 SEC24BO95487 1268 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 CLCN1P35523 988 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 USP5P45974 858 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 NUCB1Q02818 461 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 CHD1LQ86WJ1 897 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 HERC5Q9UII4 1024 aaKnown RBP11.84□□□□□ -0.51
NDUFS4-201ENST00000296684 FOCADQ5VW36 1801 aa11.83□□□□□ -0.51
NDUFS4-201ENST00000296684 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 PDE1AP54750 535 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 PPATQ06203 517 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 VGLL4Q14135 290 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 NLRP7Q8WX94 980 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 OPTNQ96CV9 577 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 FLT1P17948 1338 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
NDUFS4-201ENST00000296684 LAMB1P07942 1786 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 MYH7P12883 1935 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 PHF20L1A8MW92 1017 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 FOXN1O15353 648 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 GTF2A2P52657 109 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 TTC6Q86TZ1 520 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
NDUFS4-201ENST00000296684 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 INPP5BP32019 993 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 PPIL2Q13356 520 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 MCM6Q14566 821 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 APPBP2Q92624 585 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 ZKSCAN4Q969J2 545 aaPredicted RBP11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 TBC1D2Q9BYX2 928 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
NDUFS4-201ENST00000296684 GJA5P36382 358 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 LCORLQ8N3X6 602 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 CRACR2BQ8N4Y2 399 aaPredicted RBP11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 EHD4Q9H223 541 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 PICK1Q9NRD5 415 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 MYH1P12882 1939 aa11.8□□□□□ -0.52
NDUFS4-201ENST00000296684 CXCL11O14625 94 aa11.79□□□□□ -0.52
NDUFS4-201ENST00000296684 TRPA1O75762 1119 aa11.79□□□□□ -0.52
NDUFS4-201ENST00000296684 MBD4O95243 580 aa11.79□□□□□ -0.52
NDUFS4-201ENST00000296684 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
NDUFS4-201ENST00000296684 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
NDUFS4-201ENST00000296684 CETPP11597 493 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms