RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
RFC4-201ENST00000296273 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 MAPK4P31152 587 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 MTMR2Q13614 643 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
RFC4-201ENST00000296273 GPRC5AQ8NFJ5 357 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 TRIB2Q92519 343 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 ALPK3Q96L96 1907 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 CYP2B6P20813 491 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 MCAMP43121 646 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
RFC4-201ENST00000296273 HERVK_113P62684 666 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 TRIM32Q13049 653 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 G3BP1Q13283 466 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFC4-201ENST00000296273 RRP1BQ14684 758 aaKnown RBP12.93□□□□□ -0.34
RFC4-201ENST00000296273 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
RFC4-201ENST00000296273 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
RFC4-201ENST00000296273 TDHQ8IZJ6 230 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 TRIM34Q9BYJ4 488 aa12.93□□□□□ -0.34
RFC4-201ENST00000296273 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
RFC4-201ENST00000296273 GNAI2P04899 355 aa12.92□□□□□ -0.34
RFC4-201ENST00000296273 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 PPP4CP60510 307 aa12.92□□□□□ -0.34
RFC4-201ENST00000296273 CCAR1Q8IX12 1150 aaKnown RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
RFC4-201ENST00000296273 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.34
RFC4-201ENST00000296273 DOCK3Q8IZD9 2030 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
RFC4-201ENST00000296273 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
RFC4-201ENST00000296273 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
RFC4-201ENST00000296273 RGS2P41220 211 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
RFC4-201ENST00000296273 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 ERVK-24P63145 666 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
RFC4-201ENST00000296273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
RFC4-201ENST00000296273 FLT1P17948 1338 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 HLA-DOAP06340 250 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 SYN1P17600 705 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
RFC4-201ENST00000296273 CERS3Q8IU89 383 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 USP6NLQ92738 828 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
RFC4-201ENST00000296273 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 RBPJLQ9UBG7 517 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
RFC4-201ENST00000296273 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.35
RFC4-201ENST00000296273 PFASO15067 1338 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 COL6A1P12109 1028 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 CCNA1P78396 465 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
RFC4-201ENST00000296273 MORN1Q5T089 497 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 APBA2Q99767 749 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
RFC4-201ENST00000296273 ZBTB21Q9ULJ3 1066 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 SIPA1L1O43166 1804 aa12.89□□□□□ -0.35
RFC4-201ENST00000296273 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
RFC4-201ENST00000296273 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
RFC4-201ENST00000296273 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
RFC4-201ENST00000296273 C12orf42Q96LP6 360 aa12.88□□□□□ -0.35
RFC4-201ENST00000296273 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
RFC4-201ENST00000296273 PALD1Q9ULE6 856 aa12.88□□□□□ -0.35
RFC4-201ENST00000296273 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
RFC4-201ENST00000296273 MSCO60682 206 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 GDF11O95390 407 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
RFC4-201ENST00000296273 TRIM27P14373 513 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 USP14P54578 494 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 JAG1P78504 1218 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 Q3C1V9 767 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 LHX8Q68G74 356 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 PORCNQ9H237 461 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
RFC4-201ENST00000296273 RABGAP1Q9Y3P9 1069 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms