RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 RESP18Q5W5W9 173 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
RHO-201ENST00000296271 STK36Q9NRP7 1315 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 CASP1P29466 404 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 RFC4P35249 363 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 PDE4BQ07343 736 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 IFNKQ9P0W0 207 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 PPP6R2O75170 966 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 TROAPQ12815 778 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 SARM1Q6SZW1 724 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
RHO-201ENST00000296271 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 MYH6P13533 1939 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 DEXIO95424 95 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 NLRP12P59046 1061 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 RC3H1Q5TC82 1133 aaKnown RBP13.57□□□□□ -0.24
RHO-201ENST00000296271 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 SRBD1Q8N5C6 995 aaKnown RBP13.57□□□□□ -0.24
RHO-201ENST00000296271 DPF2Q92785 391 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 BRIP1Q9BX63 1249 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 FBXO2Q9UK22 296 aaPredicted RBP13.57□□□□□ -0.24
RHO-201ENST00000296271 PCDHA5Q9Y5H7 936 aa13.57□□□□□ -0.24
RHO-201ENST00000296271 IRS2Q9Y4H2 1338 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 SMC2O95347 1197 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 SH3RF3Q8TEJ3 882 aaPredicted RBP13.56□□□□□ -0.24
RHO-201ENST00000296271 A0A087X0B3 334 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
RHO-201ENST00000296271 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
RHO-201ENST00000296271 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
RHO-201ENST00000296271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
RHO-201ENST00000296271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
RHO-201ENST00000296271 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 SAP30BPQ9UHR5 308 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 NID2Q14112 1375 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 NPY5RQ15761 445 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 CATIPQ7Z7H3 387 aa13.55□□□□□ -0.24
RHO-201ENST00000296271 DZIP1Q86YF9 867 aaKnown RBP13.55□□□□□ -0.24
RHO-201ENST00000296271 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 CUTAO60888 179 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 CAVIN2O95810 425 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 TMTC2Q8N394 836 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
RHO-201ENST00000296271 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
RHO-201ENST00000296271 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
RHO-201ENST00000296271 ZNF174Q15697 407 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 STAMQ92783 540 aa13.54□□□□□ -0.24
RHO-201ENST00000296271 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
RHO-201ENST00000296271 FOXP1Q9H334 677 aaPredicted RBP13.54□□□□□ -0.24
RHO-201ENST00000296271 CCDC196A0A1B0GTZ2 297 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 PTPREP23469 700 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 CDC25BP30305 580 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 PLCD1P51178 756 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 GPSM2P81274 684 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 CCZ1BP86790 482 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 WASF1Q92558 559 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
RHO-201ENST00000296271 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 TSPY2A6NKD2 308 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 COBLO75128 1261 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 FGRP09769 529 aa13.53□□□□□ -0.24
RHO-201ENST00000296271 SKILP12757 684 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms