RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 ZNF396Q96N95 335 aaPredicted RBP8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 ZKSCAN3Q9BRR0 538 aa8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 ALDH8A1Q9H2A2 487 aaPredicted RBP8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 SLFN14P0C7P3 912 aa8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 KRT85P78386 507 aa8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 OLFM4Q6UX06 510 aa8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 DCP1AQ9NPI6 582 aaPredicted RBP8.86□□□□□ -0.99
SLC13A3-202ENST00000290317 ZNF831Q5JPB2 1677 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 RAD17O75943 681 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 TNNI2P48788 182 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 GNAQP50148 359 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 ZNF445P59923 1031 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 RAB3GAP1Q15042 981 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 ICE2Q659A1 982 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 ARHGAP27Q6ZUM4 889 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 RAB11FIP4Q86YS3 637 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 STAG1Q8WVM7 1258 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 GJA3Q9Y6H8 435 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 FAM205AQ6ZU69 1335 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 ANKRD36CQ5JPF3 1778 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 CCDC172P0C7W6 258 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 PPP4CP60510 307 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 FAM43BQ6ZT52 329 aaPredicted RBP8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 SH3RF3Q8TEJ3 882 aaPredicted RBP8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 PIBF1Q8WXW3 757 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 PDLIM2Q96JY6 352 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 RIOK3O14730 519 aaKnown RBP8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 PFKFB2O60825 505 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 TFAP4Q01664 338 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 GPS2Q13227 327 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 GTF3C6Q969F1 213 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 CFAP45Q9UL16 551 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 WDR19Q8NEZ3 1342 aa8.85□□□□□ -0.99
SLC13A3-202ENST00000290317 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZSCAN22P10073 491 aaPredicted RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 CRKP46108 304 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 MTA3Q9BTC8 594 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZSWIM5Q9P217 1185 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 PTPDC1A2A3K4 754 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 USP17L8P0C7I0 530 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 IKQ13123 557 aaPredicted RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 HHIPL2Q6UWX4 724 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 SLC26A6Q9BXS9 759 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZNRF3Q9ULT6 936 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZMYM6O95789 1325 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 MYH3P11055 1940 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 GPR75-ASB3A0A0A6YYF3 556 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 SYT1P21579 422 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 CREBRFQ8IUR6 639 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.997e-8■■■■□ 26.7
SLC13A3-202ENST00000290317 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 RIOK1Q9BRS2 568 aaKnown RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 ZSCAN16Q9H4T2 348 aaPredicted RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 RBM28Q9NW13 759 aaKnown RBP8.84□□□□□ -0.99
SLC13A3-202ENST00000290317 H7C1D1 291 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 TULP2O00295 520 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 MBD3O95983 291 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 LIFRP42702 1097 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 TCP10Q12799 353 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 TBC1D10CQ8IV04 446 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 DHX36Q9H2U1 1008 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 BRWD3Q6RI45 1802 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 SBK1Q52WX2 424 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 STOX1Q6ZVD7 989 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 MB21D2Q8IYB1 491 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 C17orf53Q8N3J3 647 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 AK9Q5TCS8 1911 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 COL5A3P25940 1745 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 TNKSO95271 1327 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 SYCE3A1L190 88 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 FIBPO43427 364 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 BAG4O95429 457 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 HNRNPH2P55795 449 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 EXOSC10Q01780 885 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 SATB1Q01826 763 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 TOB2Q14106 344 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 CEP120Q8N960 986 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 ZNF526Q8TF50 670 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 PSMD1Q99460 953 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 PDGFDQ9GZP0 370 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 NCOA5Q9HCD5 579 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 EPB41L4AQ9HCS5 686 aaPredicted RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
SLC13A3-202ENST00000290317 DAGLAQ9Y4D2 1042 aa8.83□□□□□ -1
SLC13A3-202ENST00000290317 CYP2D7A0A087X1C5 515 aa8.82□□□□□ -1
SLC13A3-202ENST00000290317 IL17RAQ96F46 866 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms