RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.83
PTPDC1-201ENST00000288976 MINDY4BA8MYZ0 360 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 HAND2P61296 217 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 NBPF9Q3BBW0 867 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SH3BP5LQ7L8J4 393 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 DRC7Q8IY82 874 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TMTC2Q8N394 836 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TRPM4Q8TD43 1214 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 CCDC17Q96LX7 622 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SERPINB13Q9UIV8 391 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TAF6LQ9Y6J9 622 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SHTN1A0MZ66 631 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 LIFRP42702 1097 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SF3A1Q15459 793 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SAP30BPQ9UHR5 308 aaKnown RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TACC3Q9Y6A5 838 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SH2B2O14492 632 aaPredicted RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 CYP2D6P10635 497 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 EPHX2P34913 555 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 CDK8P49336 464 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 PLCD1P51178 756 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 ANTXR2P58335 489 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 SGMS1Q86VZ5 419 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 PRC1O43663 620 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 EPS15P42566 896 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 NEK4P51957 841 aa9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 TBC1D10BQ4KMP7 808 aaPredicted RBP9.89□□□□□ -0.83
PTPDC1-201ENST00000288976 OTOFQ9HC10 1997 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 RASA1P20936 1047 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 SHMT1P34896 483 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 SAMD7Q7Z3H4 446 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 TEPSINQ96N21 525 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 MAP3K14Q99558 947 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 TOB2Q14106 344 aaPredicted RBP9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 ZNF274Q96GC6 653 aaPredicted RBP9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 TAF1DQ9H5J8 278 aaPredicted RBP9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
PTPDC1-201ENST00000288976 CLRN2A0PK11 232 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 DDTLA6NHG4 134 aaPredicted RBP9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 TCP10L2B9ZVM9 353 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 NRDCO43847 1150 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 AK2P54819 239 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 PPP2R5BQ15173 497 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 IQCA1Q86XH1 822 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 VEZTQ9HBM0 779 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 CYP2D7A0A087X1C5 515 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 ERICH2A1L162 156 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 UNCXA6NJT0 531 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 HIRAP54198 1017 aaPredicted RBP9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 DCAF15Q66K64 600 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 SYNE3Q6ZMZ3 975 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 CYB5R4Q7L1T6 521 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 DGKHQ86XP1 1220 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 CSRNP1Q96S65 589 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 MKNK2Q9HBH9 465 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 B4E1Z4 1266 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 MCTP1Q6DN14 999 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 ZFPM1Q8IX07 1006 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 IGDCC4Q8TDY8 1250 aa9.87□□□□□ -0.83
PTPDC1-201ENST00000288976 DDAH1O94760 285 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 SEC23AQ15436 765 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 ANGEL2Q5VTE6 544 aaKnown RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 Q6ZUG5 572 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 DCPSQ96C86 337 aaKnown RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 IPO9Q96P70 1041 aaKnown RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 LY9Q9HBG7 655 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 PHIPQ8WWQ0 1821 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 POTECB2RU33 542 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 EGFRP00533 1210 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CALM1P0DP23 149 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CALM2P0DP24 149 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CALM3P0DP25 149 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 FOSBP53539 338 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CRACR2BQ8N4Y2 399 aaPredicted RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 INTS4Q96HW7 963 aaKnown RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 UBAC1Q9BSL1 405 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 DNAJC18Q9H819 358 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 ZSWIM5Q9P217 1185 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 ZNF112Q9UJU3 913 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 TSPY3P0CV98 308 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 TSPY8P0CW00 308 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CACNB3P54284 484 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 PAF1Q8N7H5 531 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 CUL4AQ13619 759 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 RASA3Q14644 834 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 NOL9Q5SY16 702 aaKnown RBP9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 DYNLL2Q96FJ2 89 aa9.86□□□□□ -0.83
PTPDC1-201ENST00000288976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms