RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 INPP5BP32019 993 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 GJA5P36382 358 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 IREB2P48200 963 aaKnown RBP8.22□□□□□ -1.09
SSX2B-201ENST00000288839 VGLL4Q14135 290 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 MAP3K11Q16584 847 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 TTC22Q5TAA0 569 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 CCDC129Q6ZRS4 1044 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
SSX2B-201ENST00000288839 CERS3Q8IU89 383 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSX2B-201ENST00000288839 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
SSX2B-201ENST00000288839 HOOK2Q96ED9 719 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
SSX2B-201ENST00000288839 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 ZNF341Q9BYN7 854 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 R3HDMLQ9H3Y0 253 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 RNF186Q9NXI6 227 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 PPP4R2Q9NY27 417 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 MYH7P12883 1935 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 AK9Q5TCS8 1911 aa8.22□□□□□ -1.09
SSX2B-201ENST00000288839 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.09
SSX2B-201ENST00000288839 GPAA1O43292 621 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 MAP3K9P80192 1104 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 LRRFIP1Q32MZ4 808 aaKnown RBP8.21□□□□□ -1.1
SSX2B-201ENST00000288839 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 ABHD8Q96I13 439 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 FAM227BQ96M60 508 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.21□□□□□ -1.1
SSX2B-201ENST00000288839 DCP1AQ9NPI6 582 aaPredicted RBP8.21□□□□□ -1.1
SSX2B-201ENST00000288839 MCM9Q9NXL9 1143 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 SNCAIPQ9Y6H5 919 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 SLC4A4Q9Y6R1 1079 aa8.21□□□□□ -1.1
SSX2B-201ENST00000288839 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 ZSWIM8A7E2V4 1837 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 FOCADQ5VW36 1801 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 CYP2D7A0A087X1C5 515 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 PHF20L1A8MW92 1017 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 TBC1D8O95759 1140 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 POLR3DP05423 398 aaPredicted RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 SDSP20132 328 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 PLCD1P51178 756 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 ERICH6BQ5W0A0 696 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 ANKRD13AQ8IZ07 590 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 CRACR2BQ8N4Y2 399 aaPredicted RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 DNAJC18Q9H819 358 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 PI4KBQ9UBF8 816 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 ZNF112Q9UJU3 913 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 CSADQ9Y600 493 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 LAMB1P07942 1786 aa8.2□□□□□ -1.1
SSX2B-201ENST00000288839 MKI67P46013 3256 aaKnown RBP8.2□□□□□ -1.1
SSX2B-201ENST00000288839 GSG1L2A8MUP6 293 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 USP17L21D6R901 530 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 IGF2BP3O00425 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
SSX2B-201ENST00000288839 TBC1D12O60347 775 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 APPP05067 770 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 MAP3K10Q02779 954 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 SHROOM1Q2M3G4 852 aaPredicted RBP8.19□□□□□ -1.1
SSX2B-201ENST00000288839 SPRYD7Q5W111 196 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 CTR9Q6PD62 1173 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 ZNF589Q86UQ0 364 aaPredicted RBP8.19□□□□□ -1.1
SSX2B-201ENST00000288839 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
SSX2B-201ENST00000288839 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 OPTNQ96CV9 577 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 DYNLL2Q96FJ2 89 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 WNK4Q96J92 1243 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 MCOLN1Q9GZU1 580 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
SSX2B-201ENST00000288839 DIAPH3Q9NSV4 1193 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 ATP8A2Q9NTI2 1148 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 NAV1Q8NEY1 1877 aa8.19□□□□□ -1.1
SSX2B-201ENST00000288839 DDX60LQ5H9U9 1706 aaKnown RBP8.18□□□□□ -1.1
SSX2B-201ENST00000288839 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
SSX2B-201ENST00000288839 FOXP2O15409 715 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 GDF11O95390 407 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 GNAT2P19087 354 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 TDO2P48775 406 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 JAG1P78504 1218 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 CAP1Q01518 475 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 DGKZQ13574 1117 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
SSX2B-201ENST00000288839 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 CWC27Q6UX04 472 aaKnown RBP8.18□□□□□ -1.1
SSX2B-201ENST00000288839 TTC6Q86TZ1 520 aa8.18□□□□□ -1.1
SSX2B-201ENST00000288839 METTL16Q86W50 562 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms