RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 JRKLQ9Y4A0 524 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ST20-MTHFSA0A0A6YYL1 179 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 PEX14O75381 377 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SYF2O95926 243 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 KPNA1P52294 538 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SRLQ86TD4 932 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 FAM204AQ9H8W3 233 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 GALNT8Q9NY28 637 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ERVK-7P63135 1459 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 TET3O43151 1660 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NPC1L1Q9UHC9 1359 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 PLEKHH1Q9ULM0 1364 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ARHGEF37A1IGU5 675 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ZRANB2O95218 330 aaKnown RBP eCLIP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SARSP49591 514 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SPARCL1Q14515 664 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 RBBP5Q15291 538 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CTCFLQ8NI51 663 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SMARCC2Q8TAQ2 1214 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 RABGGTAQ92696 567 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CCDC138Q96M89 665 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 PRPF18Q99633 342 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 C1orf115Q9H7X2 142 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NR2E3Q9Y5X4 410 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ALG6Q9Y672 507 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ABCA6Q8N139 1617 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 RTEL1-TNFRSF6BF6WH68 1400 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NLRP1Q9C000 1473 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 AP1G2O75843 785 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ITGADQ13349 1161 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 MVPQ14764 893 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ARMC9Q7Z3E5 817 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 PALB2Q86YC2 1186 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ATL2Q8NHH9 583 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 RPS6KC1Q96S38 1066 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 C6orf50Q9HD87 102 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 H2AFY2Q9P0M6 372 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NUP155O75694 1391 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 BICDL2A1A5D9 508 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 IPO5O00410 1097 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 KRT3P12035 628 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 EEF2P13639 858 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 GUCA1AP43080 201 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ESRP1Q6NXG1 681 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SHQ1Q6PI26 577 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 LYSMD3Q7Z3D4 306 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 RAB42Q8N4Z0 105 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CCDC68Q9H2F9 335 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CWC25Q9NXE8 425 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SELENONQ9NZV5 590 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 UGGT1Q9NYU2 1555 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SBNO2Q9Y2G9 1366 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CARMIL2Q6F5E8 1435 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SMIM23A6NLE4 172 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ESPNB1AK53 854 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SYNCRIPO60506 623 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CCNA1P78396 465 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ASPHQ12797 758 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SF3A3Q12874 501 aaKnown RBP eCLIP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 MAP9Q49MG5 647 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 ZNF394Q53GI3 561 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 TCP11X2Q5H9J9 407 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NBPF6Q5VWK0 638 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 KRT77Q7Z794 578 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NBPF5PQ86XG9 351 aaPredicted RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CTAGE3PQ8IX95 158 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CNTROBQ8N137 903 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CCHCR1Q8TD31 782 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NBPF4Q96M43 638 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 NOX5Q96PH1 765 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 IDI2Q9BXS1 227 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 GPCPD1Q9NPB8 672 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CALCOCO1Q9P1Z2 691 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SYNMO15061 1565 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 STX10O60499 249 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 UBTFL1P0CB47 393 aaPredicted RBP4.85□□□□□ -1.63
NCOA1-201ENST00000288599 CCDC192P0DO97 292 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 ABCD1P33897 745 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 SLC12A2P55011 1212 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 ZNF568Q3ZCX4 644 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 GSTA5Q7RTV2 222 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 NIM1KQ8IY84 436 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 TAGAPQ8N103 731 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 GBP7Q8N8V2 638 aaPredicted RBP4.85□□□□□ -1.63
NCOA1-201ENST00000288599 ANKRD24Q8TF21 1146 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 LRRC46Q96FV0 321 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 RUBCNLQ9H714 662 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 MMRN2Q9H8L6 949 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 ZNF212Q9UDV6 495 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 ADD3Q9UEY8 706 aaKnown RBP4.85□□□□□ -1.63
NCOA1-201ENST00000288599 FRMD4BQ9Y2L6 1034 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 EFCAB6Q5THR3 1501 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 TLR3O15455 904 aaKnown RBP4.85□□□□□ -1.63
NCOA1-201ENST00000288599 SLC5A1P13866 664 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 PAFAH1B1P43034 410 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 MAP3K7CLP57077 242 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 AMPD3Q01432 767 aa4.85□□□□□ -1.63
NCOA1-201ENST00000288599 GOLGA8FQ08AF8 430 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms