RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PHKA1P46020 1223 aa20.75■□□□□ 0.91
PCDH1-201ENST00000287008 GSTA5Q7RTV2 222 aa20.75■□□□□ 0.91
PCDH1-201ENST00000287008 PLCD4Q9BRC7 762 aa20.75■□□□□ 0.91
PCDH1-201ENST00000287008 GRIPAP1Q4V328 841 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 CSGALNACT2Q8N6G5 542 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 CEP112Q8N8E3 955 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 KCNG1Q9UIX4 513 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 ATP7BP35670 1465 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 PPEF1O14829 653 aaPredicted RBP20.74■□□□□ 0.91
PCDH1-201ENST00000287008 ALAS1P13196 640 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 PNMA2Q9UL42 364 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 M0QZ92 97 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 KIFAP3Q92845 792 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 SEMA3EO15041 775 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 TUBB4AP04350 444 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 KRT5P13647 590 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 MCTP2Q6DN12 878 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 INCENPQ9NQS7 918 aa20.74■□□□□ 0.91
PCDH1-201ENST00000287008 KCNQ4P56696 695 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 ZNF830Q96NB3 372 aaPredicted RBP20.73■□□□□ 0.91
PCDH1-201ENST00000287008 IQCGQ9H095 443 aaKnown RBP20.73■□□□□ 0.91
PCDH1-201ENST00000287008 GUCA1BQ9UMX6 200 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 MAPK8IP1Q9UQF2 711 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 ERVK-7P63135 1459 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 CTAGE9A4FU28 777 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 GAS7O60861 476 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 UBE3CQ15386 1083 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 CALUO43852 315 aaPredicted RBP20.73■□□□□ 0.91
PCDH1-201ENST00000287008 OTUD6BQ8N6M0 293 aa20.73■□□□□ 0.91
PCDH1-201ENST00000287008 A0A0D9SFI3 127 aa20.72■□□□□ 0.91
PCDH1-201ENST00000287008 VWA3BQ502W6 1294 aa20.72■□□□□ 0.91
PCDH1-201ENST00000287008 CCDC17Q96LX7 622 aa20.72■□□□□ 0.91
PCDH1-201ENST00000287008 ZSCAN10Q96SZ4 725 aaPredicted RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 TNKSO95271 1327 aa20.72■□□□□ 0.91
PCDH1-201ENST00000287008 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 THRAP3Q9Y2W1 955 aaKnown RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 PUS3Q9BZE2 481 aaKnown RBP20.72■□□□□ 0.91
PCDH1-201ENST00000287008 KLRF2D3W0D1 207 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 MYCT1Q8N699 235 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 NOX5Q96PH1 765 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 CTNND2Q9UQB3 1225 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 MLKLQ8NB16 471 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 SREK1Q8WXA9 508 aaKnown RBP20.71■□□□□ 0.91
PCDH1-201ENST00000287008 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
PCDH1-201ENST00000287008 NT5C3AQ9H0P0 336 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 POLR3GO15318 223 aaPredicted RBP20.71■□□□□ 0.91
PCDH1-201ENST00000287008 EXOC3O60645 756 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 JAK2O60674 1132 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 CIAO1O76071 339 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 VPS16Q9H269 839 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 GPR108Q9NPR9 543 aa20.71■□□□□ 0.91
PCDH1-201ENST00000287008 A0A1W2PRG0 241 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 FGAP02671 866 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 KIF22Q14807 665 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 DYMQ7RTS9 669 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 FANCBQ8NB91 859 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 UIMC1Q96RL1 719 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 ERVV-1B6SEH8 477 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 CABP7Q86V35 215 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 ZNF274Q96GC6 653 aaPredicted RBP20.7■□□□□ 0.9
PCDH1-201ENST00000287008 TESPA1A2RU30 521 aaPredicted RBP20.7■□□□□ 0.9
PCDH1-201ENST00000287008 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
PCDH1-201ENST00000287008 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 MLXIPQ9HAP2 919 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
PCDH1-201ENST00000287008 FERP16591 822 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 ANKRD35Q8N283 1001 aa20.7■□□□□ 0.9
PCDH1-201ENST00000287008 HSF2BPO75031 334 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 PCP11498 1178 aaKnown RBP20.69■□□□□ 0.9
PCDH1-201ENST00000287008 TNFAIP3P21580 790 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 NOLC1Q14978 699 aaKnown RBP eCLIP20.69■□□□□ 0.9
PCDH1-201ENST00000287008 SLFN13Q68D06 897 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 PIGBQ92521 554 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 FLOT1O75955 427 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 GADL1Q6ZQY3 521 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 LEO1Q8WVC0 666 aaPredicted RBP20.69■□□□□ 0.9
PCDH1-201ENST00000287008 PRIMPOLQ96LW4 560 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 ARL1P40616 181 aaPredicted RBP20.69■□□□□ 0.9
PCDH1-201ENST00000287008 FBXO11Q86XK2 927 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 HACE1Q8IYU2 909 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 LZTFL1Q9NQ48 299 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 ERICH4A6NGS2 130 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 ZNF202O95125 648 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 RAD51AP2Q09MP3 1159 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 PAK1Q13153 545 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 ABCB5Q2M3G0 1257 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 OTUD6AQ7L8S5 288 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 MTUS1Q9ULD2 1270 aa20.69■□□□□ 0.9
PCDH1-201ENST00000287008 NLRP10Q86W26 655 aa20.68■□□□□ 0.9
PCDH1-201ENST00000287008 SRRTQ9BXP5 876 aaKnown RBP20.68■□□□□ 0.9
PCDH1-201ENST00000287008 AKR1B15C9JRZ8 316 aaPredicted RBP20.68■□□□□ 0.9
PCDH1-201ENST00000287008 TPH2Q8IWU9 490 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms