RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 AK9Q5TCS8 1911 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 EXOC5O00471 708 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 PYGLP06737 847 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 CCDC13Q8IYE1 715 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SNX21Q969T3 373 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SCYL1Q96KG9 808 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SLC9C2Q5TAH2 1124 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-201ENST00000282516 MIS12Q9H081 205 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 IMPACTQ9P2X3 320 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 RNASE9P60153 205 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 TACO1Q9BSH4 297 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 OATP04181 439 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 TMTC4Q5T4D3 741 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 MCM9Q9NXL9 1143 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 GRM1Q13255 1194 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CTAGE3PQ8IX95 158 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CC2D2AQ9P2K1 1620 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CHMP2AO43633 222 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 SDSP20132 328 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 RHPN1Q8TCX5 695 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 SPATS2LQ9NUQ6 558 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 F8W031 263 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 BAG2O95816 211 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 ATP6V1AP38606 617 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 ELF2Q15723 593 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 LRRD1A4D1F6 860 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 ATP5J2-PTCD1G3V325 749 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 U2AF2P26368 475 aaKnown RBP eCLIP9.63□□□□□ -0.878e-9■■□□□ 12
NIPBL-201ENST00000282516 OAS2P29728 719 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 TEKT1Q969V4 418 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CCNT1O60563 726 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 LMNB1P20700 586 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 EFHD1Q9BUP0 239 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 ANKRD2Q9GZV1 360 aa9.63□□□□□ -0.87
NIPBL-201ENST00000282516 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
NIPBL-201ENST00000282516 CTNNA1P35221 906 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 VPS41P49754 854 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 GOLGA8KD6RF30 607 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 HOOK2Q96ED9 719 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 TRPC6Q9Y210 931 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 ATICP31939 592 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 RNASELQ05823 741 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 CFAP61Q8NHU2 1237 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 PKD2L1Q9P0L9 805 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 PTPDC1A2A3K4 754 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 MAN1A2O60476 641 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 TRIM37O94972 964 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 DNM2P50570 870 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 CAPN7Q9Y6W3 813 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 GARSP41250 739 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 IFNL2Q8IZJ0 200 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 LZTS2Q9BRK4 669 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 DDX41Q9UJV9 622 aaKnown RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 E9PMD0 336 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 ALDH1L1O75891 902 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 USTQ9Y2C2 406 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 PI4KAP2A4QPH2 592 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 THAP12O43422 761 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 PALM2Q8IXS6 379 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 PI4KAP1Q8N8J0 262 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 EYA3Q99504 573 aa9.62□□□□□ -0.87
NIPBL-201ENST00000282516 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-201ENST00000282516 ARHGAP45Q92619 1136 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 MED4Q9NPJ6 270 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 ANKRD36BQ8N2N9 1353 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PDE6AP16499 860 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 NMIQ13287 307 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PLIN2Q99541 437 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 AZI2Q9H6S1 392 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 GNA14O95837 355 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 BRD3Q15059 726 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms