RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 MTMR2Q13614 643 aa23.49■■□□□ 1.35
MSGN1-201ENST00000281047 SH3TC2Q8TF17 1288 aa23.49■■□□□ 1.35
MSGN1-201ENST00000281047 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.49■■□□□ 1.35
MSGN1-201ENST00000281047 LOC285556D6RIA3 1793 aa23.49■■□□□ 1.35
MSGN1-201ENST00000281047 C19orf81C9J6K1 198 aa23.48■■□□□ 1.35
MSGN1-201ENST00000281047 USP17L10C9JJH3 530 aa23.48■■□□□ 1.35
MSGN1-201ENST00000281047 GCLCP48506 637 aaPredicted RBP23.48■■□□□ 1.35
MSGN1-201ENST00000281047 TATDN1Q6P1N9 297 aa23.48■■□□□ 1.35
MSGN1-201ENST00000281047 ANKRD13CQ8N6S4 541 aa23.48■■□□□ 1.35
MSGN1-201ENST00000281047 EDC3Q96F86 508 aaKnown RBP23.48■■□□□ 1.35
MSGN1-201ENST00000281047 HAUS7Q99871 368 aa23.48■■□□□ 1.35
MSGN1-201ENST00000281047 RBBP6Q7Z6E9 1792 aaKnown RBP23.47■■□□□ 1.35
MSGN1-201ENST00000281047 TNRC18O15417 2968 aaPredicted RBP23.47■■□□□ 1.35
MSGN1-201ENST00000281047 TCRBV5S4A2TA0A5A2 114 aa23.47■■□□□ 1.35
MSGN1-201ENST00000281047 POLR3DP05423 398 aaPredicted RBP23.47■■□□□ 1.35
MSGN1-201ENST00000281047 JAG1P78504 1218 aa23.47■■□□□ 1.35
MSGN1-201ENST00000281047 FAM110CQ1W6H9 321 aa23.47■■□□□ 1.35
MSGN1-201ENST00000281047 MYH1P12882 1939 aa23.47■■□□□ 1.35
MSGN1-201ENST00000281047 GH2P01242 217 aa23.46■■□□□ 1.35
MSGN1-201ENST00000281047 GRK4P32298 578 aa23.46■■□□□ 1.35
MSGN1-201ENST00000281047 PRKCZQ05513 592 aa23.46■■□□□ 1.35
MSGN1-201ENST00000281047 ASCC2Q9H1I8 757 aaPredicted RBP23.46■■□□□ 1.35
MSGN1-201ENST00000281047 TNPO2O14787 897 aaKnown RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 SMARCA5O60264 1052 aaPredicted RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 EN2P19622 333 aaPredicted RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 IRX3P78415 501 aaPredicted RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 SHROOM1Q2M3G4 852 aaPredicted RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 CERKLQ49MI3 558 aaPredicted RBP23.45■■□□□ 1.34
MSGN1-201ENST00000281047 DCTPP1Q9H773 170 aa23.45■■□□□ 1.34
MSGN1-201ENST00000281047 MCM9Q9NXL9 1143 aa23.45■■□□□ 1.34
MSGN1-201ENST00000281047 MYCP01106 439 aaPredicted RBP23.44■■□□□ 1.34
MSGN1-201ENST00000281047 ADD2P35612 726 aa23.44■■□□□ 1.34
MSGN1-201ENST00000281047 LCORLQ8N3X6 602 aa23.44■■□□□ 1.34
MSGN1-201ENST00000281047 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
MSGN1-201ENST00000281047 CABP5Q9NP86 173 aa23.44■■□□□ 1.34
MSGN1-201ENST00000281047 ECHDC1Q9NTX5 307 aa23.44■■□□□ 1.34
MSGN1-201ENST00000281047 HOXA7P31268 230 aaPredicted RBP23.43■■□□□ 1.34
MSGN1-201ENST00000281047 PLCD1P51178 756 aa23.43■■□□□ 1.34
MSGN1-201ENST00000281047 ABCB5Q2M3G0 1257 aa23.43■■□□□ 1.34
MSGN1-201ENST00000281047 ZSCAN25Q6NSZ9 544 aa23.43■■□□□ 1.34
MSGN1-201ENST00000281047 SLAIN1Q8ND83 568 aa23.43■■□□□ 1.34
MSGN1-201ENST00000281047 COA7Q96BR5 231 aa23.43■■□□□ 1.34
MSGN1-201ENST00000281047 BIN2Q9UBW5 565 aaPredicted RBP23.43■■□□□ 1.34
MSGN1-201ENST00000281047 PDE4DIPQ5VU43 2346 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 UBXN2AP68543 259 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 UBE3CQ15386 1083 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 PRPF38BQ5VTL8 546 aaKnown RBP23.42■■□□□ 1.34
MSGN1-201ENST00000281047 USP17L2Q6R6M4 530 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 SDR42E1Q8WUS8 393 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 FEZ1Q99689 392 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 ARMT1Q9H993 441 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 DCP1AQ9NPI6 582 aaPredicted RBP23.42■■□□□ 1.34
MSGN1-201ENST00000281047 GABRQQ9UN88 632 aa23.42■■□□□ 1.34
MSGN1-201ENST00000281047 DDX60LQ5H9U9 1706 aaKnown RBP23.42■■□□□ 1.34
MSGN1-201ENST00000281047 MGAMO43451 1857 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 NAV1Q8NEY1 1877 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 MBD4O95243 580 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 SHMT1P34896 483 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 FLT3LGP49771 235 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
MSGN1-201ENST00000281047 RAB3GAP1Q15042 981 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 ATP8A2Q9NTI2 1148 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 TAOK2Q9UL54 1235 aa23.41■■□□□ 1.34
MSGN1-201ENST00000281047 KIAA0100Q14667 2235 aaKnown RBP23.41■■□□□ 1.34
MSGN1-201ENST00000281047 CENPFP49454 3210 aa23.4■■□□□ 1.34
MSGN1-201ENST00000281047 USP14P54578 494 aa23.4■■□□□ 1.34
MSGN1-201ENST00000281047 GABPAQ06546 454 aa23.4■■□□□ 1.34
MSGN1-201ENST00000281047 IRF5Q13568 498 aa23.4■■□□□ 1.34
MSGN1-201ENST00000281047 GTF3C2Q8WUA4 911 aaPredicted RBP23.4■■□□□ 1.34
MSGN1-201ENST00000281047 ADCY3O60266 1144 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 AMOTL1Q8IY63 956 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 PXYLP1Q8TE99 480 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 DDRGK1Q96HY6 314 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 EMILIN3Q9NT22 766 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 MORF4L1Q9UBU8 362 aa23.39■■□□□ 1.33
MSGN1-201ENST00000281047 HERVK_113P62684 666 aa23.38■■□□□ 1.33
MSGN1-201ENST00000281047 MTFR1Q15390 333 aa23.38■■□□□ 1.33
MSGN1-201ENST00000281047 NKX2-3Q8TAU0 364 aa23.38■■□□□ 1.33
MSGN1-201ENST00000281047 C12orf42Q96LP6 360 aa23.38■■□□□ 1.33
MSGN1-201ENST00000281047 P2RX7Q99572 595 aaKnown RBP23.38■■□□□ 1.33
MSGN1-201ENST00000281047 SWAP70Q9UH65 585 aa23.38■■□□□ 1.33
MSGN1-201ENST00000281047 ZYXQ15942 572 aaKnown RBP23.37■■□□□ 1.33
MSGN1-201ENST00000281047 SLFNL1Q499Z3 407 aa23.37■■□□□ 1.33
MSGN1-201ENST00000281047 KIAA1683Q9H0B3 1180 aa23.37■■□□□ 1.33
MSGN1-201ENST00000281047 PCDHB15Q9Y5E8 787 aa23.37■■□□□ 1.33
MSGN1-201ENST00000281047 MPHOSPH10O00566 681 aaKnown RBP23.36■■□□□ 1.33
MSGN1-201ENST00000281047 PRKAB2O43741 272 aa23.36■■□□□ 1.33
MSGN1-201ENST00000281047 CCL5P13501 91 aa23.36■■□□□ 1.33
MSGN1-201ENST00000281047 GPRC5AQ8NFJ5 357 aa23.36■■□□□ 1.33
MSGN1-201ENST00000281047 RNF208Q9H0X6 261 aa23.36■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L15C9J2P7 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L13C9JLJ4 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L11C9JVI0 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L18D6R9N7 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L22D6RA61 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L17D6RBQ6 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L19D6RCP7 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L20D6RJB6 530 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 CYP2D6P10635 497 aa23.35■■□□□ 1.33
MSGN1-201ENST00000281047 USP17L24Q0WX57 530 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms