RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 DDIT3P35638 169 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 HHIPL2Q6UWX4 724 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 OSBPL5Q9H0X9 879 aaPredicted RBP15.58■□□□□ 0.08
ACER3-201ENST00000278544 HDAC9Q9UKV0 1011 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 H3BQV1 296 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
ACER3-201ENST00000278544 STX6O43752 255 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 AKR1B1P15121 316 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
ACER3-201ENST00000278544 NSUN7Q8NE18 718 aaKnown RBP15.57■□□□□ 0.08
ACER3-201ENST00000278544 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
ACER3-201ENST00000278544 SLC26A6Q9BXS9 759 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 CNOT7Q9UIV1 285 aaKnown RBP15.57■□□□□ 0.08
ACER3-201ENST00000278544 PFKFB2O60825 505 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 CSRNP1Q96S65 589 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 RASA1P20936 1047 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 RAB3GAP1Q15042 981 aa15.57■□□□□ 0.08
ACER3-201ENST00000278544 ORC3Q9UBD5 711 aaPredicted RBP15.57■□□□□ 0.08
ACER3-201ENST00000278544 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 WNT10BO00744 389 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 TMOD2Q9NZR1 351 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 SERPINB13Q9UIV8 391 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 TFIP11Q9UBB9 837 aaKnown RBP15.56■□□□□ 0.08
ACER3-201ENST00000278544 GIMAP6Q6P9H5 292 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 CEP95Q96GE4 821 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 INTS4Q96HW7 963 aaKnown RBP15.56■□□□□ 0.08
ACER3-201ENST00000278544 CWC22Q9HCG8 908 aaKnown RBP15.56■□□□□ 0.08
ACER3-201ENST00000278544 MYOZ2Q9NPC6 264 aa15.56■□□□□ 0.08
ACER3-201ENST00000278544 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 GUCY1A2P33402 732 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 EPS15P42566 896 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 ZNF70Q9UC06 446 aaPredicted RBP15.55■□□□□ 0.08
ACER3-201ENST00000278544 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 SERPINA10Q9UK55 444 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.55■□□□□ 0.083e-9■■■■□ 23.2
ACER3-201ENST00000278544 TTC6Q86TZ1 520 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 SUGT1Q9Y2Z0 365 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 FIBPO43427 364 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 HLA-DOAP06340 250 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 ZYXQ15942 572 aaKnown RBP15.55■□□□□ 0.08
ACER3-201ENST00000278544 SBK1Q52WX2 424 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 GMLQ99445 158 aa15.55■□□□□ 0.08
ACER3-201ENST00000278544 NUCB2P80303 420 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 RTN1Q16799 776 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
ACER3-201ENST00000278544 C9orf131Q5VYM1 1079 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 STAG2Q8N3U4 1231 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 ZNF274Q96GC6 653 aaPredicted RBP15.54■□□□□ 0.08
ACER3-201ENST00000278544 AGXT2Q9BYV1 514 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 DHX16O60231 1041 aaKnown RBP15.54■□□□□ 0.08
ACER3-201ENST00000278544 PRPF40AO75400 957 aaKnown RBP15.54■□□□□ 0.08
ACER3-201ENST00000278544 BAG4O95429 457 aaKnown RBP15.54■□□□□ 0.08
ACER3-201ENST00000278544 TNIP1Q15025 636 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 CATIPQ7Z7H3 387 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 CLIP2Q9UDT6 1046 aa15.54■□□□□ 0.08
ACER3-201ENST00000278544 ZMYM6O95789 1325 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.53■□□□□ 0.08
ACER3-201ENST00000278544 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
ACER3-201ENST00000278544 SEC23AQ15436 765 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 TRPM4Q8TD43 1214 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 FTOQ9C0B1 505 aaKnown RBP eCLIP15.53■□□□□ 0.08
ACER3-201ENST00000278544 FAM217BQ9NTX9 383 aaPredicted RBP15.53■□□□□ 0.08
ACER3-201ENST00000278544 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
ACER3-201ENST00000278544 ATP2B1P20020 1258 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 MCM4P33991 863 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 USP17L2Q6R6M4 530 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
ACER3-201ENST00000278544 LMNB1P20700 586 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.08
ACER3-201ENST00000278544 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 FANCBQ8NB91 859 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 PNMA1Q8ND90 353 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 KCNJ14Q9UNX9 436 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 MTMR6Q9Y217 621 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 CNPY2Q9Y2B0 182 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 C16orf86Q6ZW13 317 aa15.52■□□□□ 0.08
ACER3-201ENST00000278544 MYO1BO43795 1136 aa15.52■□□□□ 0.07
ACER3-201ENST00000278544 JAG1P78504 1218 aa15.52■□□□□ 0.07
ACER3-201ENST00000278544 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.07
ACER3-201ENST00000278544 ZNF526Q8TF50 670 aaPredicted RBP15.52■□□□□ 0.07
ACER3-201ENST00000278544 ANP32EQ9BTT0 268 aa15.52■□□□□ 0.07
ACER3-201ENST00000278544 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.07
ACER3-201ENST00000278544 V9GY48 417 aaPredicted RBP15.52■□□□□ 0.07
ACER3-201ENST00000278544 BRD1O95696 1058 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 ZSCAN22P10073 491 aaPredicted RBP15.51■□□□□ 0.07
ACER3-201ENST00000278544 SHMT1P34896 483 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 RASA3Q14644 834 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 TMEM47Q9BQJ4 181 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 RRP1BQ14684 758 aaKnown RBP15.51■□□□□ 0.07
ACER3-201ENST00000278544 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms