RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MYH7P12883 1935 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 IGSF3O75054 1194 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 USP5P45974 858 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 IRF5Q13568 498 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 SH3D19Q5HYK7 790 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 MAGEB6Q8N7X4 407 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 PXYLP1Q8TE99 480 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 DPF3Q92784 378 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 ZBTB21Q9ULJ3 1066 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 CEP290O15078 2479 aa15.56■□□□□ 0.08
CD44-203ENST00000278386 ALPK3Q96L96 1907 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 H0YGN5 161 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 FARP2O94887 1054 aaPredicted RBP15.55■□□□□ 0.08
CD44-203ENST00000278386 BACE1P56817 501 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 SHROOM1Q2M3G4 852 aaPredicted RBP15.55■□□□□ 0.08
CD44-203ENST00000278386 CERS3Q8IU89 383 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 HTATIP2Q9BUP3 242 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 WDR18Q9BV38 432 aa15.55■□□□□ 0.08
CD44-203ENST00000278386 MAP3K12Q12852 859 aa15.54■□□□□ 0.08
CD44-203ENST00000278386 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
CD44-203ENST00000278386 FOXP4Q8IVH2 680 aaPredicted RBP15.54■□□□□ 0.08
CD44-203ENST00000278386 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
CD44-203ENST00000278386 ANTXR1Q9H6X2 564 aa15.54■□□□□ 0.08
CD44-203ENST00000278386 IL1RAPL2Q9NP60 686 aa15.54■□□□□ 0.08
CD44-203ENST00000278386 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 APBB1O00213 710 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 SGPL1O95470 568 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 JAG1P78504 1218 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 FEZ1Q99689 392 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 GINM1Q9NU53 330 aa15.53■□□□□ 0.08
CD44-203ENST00000278386 COLQQ9Y215 455 aaPredicted RBP15.53■□□□□ 0.08
CD44-203ENST00000278386 C19orf81C9J6K1 198 aa15.52■□□□□ 0.08
CD44-203ENST00000278386 TFRCP02786 760 aaKnown RBP15.52■□□□□ 0.08
CD44-203ENST00000278386 MS4A1P11836 297 aa15.52■□□□□ 0.08
CD44-203ENST00000278386 HERVK_113P62684 666 aa15.52■□□□□ 0.08
CD44-203ENST00000278386 METTL16Q86W50 562 aaKnown RBP15.52■□□□□ 0.08
CD44-203ENST00000278386 BAZ2AQ9UIF9 1905 aaKnown RBP15.52■□□□□ 0.07
CD44-203ENST00000278386 FRMPD3Q5JV73 1810 aa15.52■□□□□ 0.07
CD44-203ENST00000278386 GH2P01242 217 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 HMGCRP04035 888 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
CD44-203ENST00000278386 ZYXQ15942 572 aaKnown RBP15.51■□□□□ 0.07
CD44-203ENST00000278386 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 RHPN1Q8TCX5 695 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 DNAJC2Q99543 621 aaKnown RBP15.51■□□□□ 0.07
CD44-203ENST00000278386 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.51■□□□□ 0.07
CD44-203ENST00000278386 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 SERPINB13Q9UIV8 391 aa15.51■□□□□ 0.07
CD44-203ENST00000278386 HMMRO75330 724 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 USP17L2Q6R6M4 530 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 UBE2Q1Q7Z7E8 422 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 TTC6Q86TZ1 520 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 CCAR1Q8IX12 1150 aaKnown RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 CLASRPQ8N2M8 674 aaKnown RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 P2RX7Q99572 595 aaKnown RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 CWC22Q9HCG8 908 aaKnown RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 PAK6Q9NQU5 681 aaPredicted RBP15.5■□□□□ 0.07
CD44-203ENST00000278386 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
CD44-203ENST00000278386 TRIOBPQ9H2D6 2365 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 MAGEB6P1A0A0J9YX57 407 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 PEX10O60683 326 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 IFIT2P09913 472 aaKnown RBP15.49■□□□□ 0.07
CD44-203ENST00000278386 FXR1P51114 621 aaKnown RBP eCLIP15.49■□□□□ 0.07
CD44-203ENST00000278386 TMED8Q6PL24 325 aaPredicted RBP15.49■□□□□ 0.07
CD44-203ENST00000278386 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
CD44-203ENST00000278386 KIF1BPQ96EK5 621 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 EHD4Q9H223 541 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 TXNRD2Q9NNW7 524 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
CD44-203ENST00000278386 GOLIM4O00461 696 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 POLR3DP05423 398 aaPredicted RBP15.48■□□□□ 0.07
CD44-203ENST00000278386 PDE6AP16499 860 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 CYP2B6P20813 491 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 ERVK-24P63145 666 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 ABCB5Q2M3G0 1257 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
CD44-203ENST00000278386 TATDN1Q6P1N9 297 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 SOCS4Q8WXH5 440 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 NUDT12Q9BQG2 462 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 RIOK1Q9BRS2 568 aaKnown RBP15.48■□□□□ 0.07
CD44-203ENST00000278386 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
CD44-203ENST00000278386 CABP5Q9NP86 173 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
CD44-203ENST00000278386 EVI5O60447 810 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 CAPN2P17655 700 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 MAPK4P31152 587 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 USP14P54578 494 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 TRIM32Q13049 653 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 SLC9C2Q5TAH2 1124 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 RPAP2Q8IXW5 612 aaPredicted RBP15.47■□□□□ 0.07
CD44-203ENST00000278386 TRIB2Q92519 343 aa15.47■□□□□ 0.07
CD44-203ENST00000278386 HMX1Q9NP08 348 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms