RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 USP5P45974 858 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 NASPP49321 788 aaPredicted RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 C14orf80Q86SX3 495 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 DGKHQ86XP1 1220 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 HSCBQ8IWL3 235 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 TMEM74Q96NL1 305 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 SMC4Q9NTJ3 1288 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 ZMYM5Q9UJ78 669 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 INSRP06213 1382 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 ANO9A1A5B4 782 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 PRRT4C9JH25 899 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 NBPF8Q3BBV2 869 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 MAPRE3Q9UPY8 281 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 A0A087WZG4 1122 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 ELL2O00472 640 aaPredicted RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 DIAPH1O60610 1272 aaKnown RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 KRT85P78386 507 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 USP4Q13107 963 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 SLC10A5Q5PT55 438 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 LVRNQ6Q4G3 990 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.53□□□□□ -1.843e-6■■■□□ 18.7
HERC4-201ENST00000277817 PHC3Q8NDX5 983 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 ST13P5Q8NFI4 369 aaPredicted RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 OTUD5Q96G74 571 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 RABGEF1Q9UJ41 708 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 USP3Q9Y6I4 520 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 CENPJQ9HC77 1338 aaPredicted RBP3.53□□□□□ -1.85
HERC4-201ENST00000277817 GPRASP1Q5JY77 1395 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 C9IYK1 514 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 EML1O00423 815 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 PPP1R12AO14974 1030 aaPredicted RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 APBA3O96018 575 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 PTMAP06454 111 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 VARSP26640 1264 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 IRS1P35568 1242 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 OS9Q13438 667 aaPredicted RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 GLIPR1L2Q4G1C9 344 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 MRM1Q6IN84 353 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 ABTB2Q8N961 1025 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 CEP89Q96ST8 783 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 SARGQ9BW04 601 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 GGT7Q9UJ14 662 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 SPG7Q9UQ90 795 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 IPPQ9Y573 584 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 PTCH2Q9Y6C5 1203 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 COL4A1P02462 1669 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 A0A1B0GVC2 190 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 E2F8A0AVK6 867 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 FAM221AA4D161 298 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 LGR5O75473 907 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 RXRGP48443 463 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 HDGFP51858 240 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 USPL1Q5W0Q7 1092 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 KIAA0825Q8IV33 1275 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 ETNK1Q9HBU6 452 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 KIAA1468Q9P260 1216 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 ANKRD36CQ5JPF3 1778 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 FRMPD3Q5JV73 1810 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 EPB41L2O43491 1005 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 TIMM44O43615 452 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 CCNYL3P0C7X3 344 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 NEK2P51955 445 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 ATP2B2Q01814 1243 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 AAMPQ13685 434 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 RAPGEF1Q13905 1077 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 TRIM61Q5EBN2 209 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 C19orf47Q8N9M1 422 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 RTF1Q92541 710 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 XAGE2Q96GT9 111 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 NAP1L5Q96NT1 182 aaPredicted RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 STRN4Q9NRL3 753 aa3.52□□□□□ -1.85
HERC4-201ENST00000277817 MRPS23Q9Y3D9 190 aaKnown RBP3.52□□□□□ -1.85
HERC4-201ENST00000277817 MYL1P05976 194 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 RAB27AP51159 221 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 NBPF1Q3BBV0 1214 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 C1QTNF12Q5T7M4 302 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PLBD1Q6P4A8 553 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 STRA8Q7Z7C7 330 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 EPS8L3Q8TE67 593 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 TRIM56Q9BRZ2 755 aaKnown RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 CLIC5Q9NZA1 410 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 LZTS1Q9Y250 596 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 MAP4K5Q9Y4K4 846 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 ARAP2Q8WZ64 1704 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 HMGB1P1B2RPK0 211 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 CDK2AP1O14519 115 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 HSPA2P54652 639 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PPP2R5AQ15172 486 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 B3GNT9Q6UX72 402 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 LAPTM4BQ86VI4 370 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 GALNT12Q8IXK2 581 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 TNS4Q8IZW8 715 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 TAB3Q8N5C8 712 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 KDF1Q8NAX2 398 aaPredicted RBP3.51□□□□□ -1.85
HERC4-201ENST00000277817 CCDC74AQ96AQ1 378 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 CLUHP3Q96NS8 147 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 TNKS2Q9H2K2 1166 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 ADAMTS8Q9UP79 889 aa3.51□□□□□ -1.85
HERC4-201ENST00000277817 PCDHB9Q9Y5E1 797 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms