RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 CCDC102BQ68D86 513 aa15.17■□□□□ 0.02
MRPS28-201ENST00000276585 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
MRPS28-201ENST00000276585 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
MRPS28-201ENST00000276585 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
MRPS28-201ENST00000276585 GAS2L1Q99501 681 aaPredicted RBP15.17■□□□□ 0.02
MRPS28-201ENST00000276585 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
MRPS28-201ENST00000276585 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
MRPS28-201ENST00000276585 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
MRPS28-201ENST00000276585 LTBP2Q14767 1821 aa15.16■□□□□ 0.02
MRPS28-201ENST00000276585 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
MRPS28-201ENST00000276585 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
MRPS28-201ENST00000276585 LRFN3Q9BTN0 628 aa15.16■□□□□ 0.02
MRPS28-201ENST00000276585 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
MRPS28-201ENST00000276585 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
MRPS28-201ENST00000276585 SEMA3EO15041 775 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 ATP8B2P98198 1209 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 NFIAQ12857 509 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 DIXDC1Q155Q3 683 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 NECAB3Q96P71 396 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-201ENST00000276585 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
MRPS28-201ENST00000276585 RFX7Q2KHR2 1363 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
MRPS28-201ENST00000276585 DNAJB2P25686 324 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
MRPS28-201ENST00000276585 ZNF576Q9H609 170 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
MRPS28-201ENST00000276585 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■□□□□ 11.1
MRPS28-201ENST00000276585 CCDC85BQ15834 202 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-201ENST00000276585 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
MRPS28-201ENST00000276585 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
MRPS28-201ENST00000276585 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
MRPS28-201ENST00000276585 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-201ENST00000276585 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
MRPS28-201ENST00000276585 MUC6Q6W4X9 2439 aa15.13■□□□□ 0.01
MRPS28-201ENST00000276585 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
MRPS28-201ENST00000276585 PTPRFP10586 1907 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-201ENST00000276585 CCL14Q16627 93 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 TMEM31Q5JXX7 168 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 PROCA1Q8NCQ7 364 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-201ENST00000276585 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-201ENST00000276585 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
MRPS28-201ENST00000276585 PLXNB2O15031 1838 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 GAKO14976 1311 aa15.12■□□□□ 0.01
MRPS28-201ENST00000276585 RGS2P41220 211 aa15.11■□□□□ 0.01
MRPS28-201ENST00000276585 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
MRPS28-201ENST00000276585 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
MRPS28-201ENST00000276585 AKNAD1Q5T1N1 836 aa15.11■□□□□ 0.01
MRPS28-201ENST00000276585 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
MRPS28-201ENST00000276585 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
MRPS28-201ENST00000276585 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
MRPS28-201ENST00000276585 TIFAQ96CG3 184 aa15.11■□□□□ 0.01
MRPS28-201ENST00000276585 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
MRPS28-201ENST00000276585 DNM1LO00429 736 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
MRPS28-201ENST00000276585 LDHBP07195 334 aaKnown RBP15.1■□□□□ 0.01
MRPS28-201ENST00000276585 CNGA1P29973 690 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 EPHX3Q9H6B9 360 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 MORF4L1Q9UBU8 362 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 ATRNL1Q5VV63 1379 aa15.1■□□□□ 0.01
MRPS28-201ENST00000276585 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 MCAMP43121 646 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 TRIM60Q495X7 471 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 SLC39A5Q6ZMH5 540 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 LPAR1Q92633 364 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 APBA2Q99767 749 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 PRDM12Q9H4Q4 367 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 PDLIM7Q9NR12 457 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
MRPS28-201ENST00000276585 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
MRPS28-201ENST00000276585 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0.01
MRPS28-201ENST00000276585 MSCO60682 206 aa15.08■□□□□ 0
MRPS28-201ENST00000276585 IGFBP4P22692 258 aa15.08■□□□□ 0
MRPS28-201ENST00000276585 HMGCS2P54868 508 aa15.08■□□□□ 0
MRPS28-201ENST00000276585 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
MRPS28-201ENST00000276585 SPP2Q13103 211 aa15.08■□□□□ 0
MRPS28-201ENST00000276585 MFSD14CQ5VZR4 134 aa15.08■□□□□ 0
MRPS28-201ENST00000276585 SH3RF1Q7Z6J0 888 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms