RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MYH8P13535 1937 aa17.48■□□□□ 0.39
HMGN3-201ENST00000275036 DOCK3Q8IZD9 2030 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 SLC9C1Q4G0N8 1177 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
HMGN3-201ENST00000275036 PROCA1Q8NCQ7 364 aaPredicted RBP17.47■□□□□ 0.39
HMGN3-201ENST00000275036 SRRDQ9UH36 339 aa17.47■□□□□ 0.39
HMGN3-201ENST00000275036 KIAA0100Q14667 2235 aaKnown RBP17.47■□□□□ 0.39
HMGN3-201ENST00000275036 GNRH1P01148 92 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 PLCD1P51178 756 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 MTMR2Q13614 643 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 ARHGEF6Q15052 776 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
HMGN3-201ENST00000275036 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 WDR18Q9BV38 432 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 ARMT1Q9H993 441 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
HMGN3-201ENST00000275036 FMNL1O95466 1100 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-201ENST00000275036 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-201ENST00000275036 ASNSP08243 561 aa17.45■□□□□ 0.38
HMGN3-201ENST00000275036 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
HMGN3-201ENST00000275036 PRKCZQ05513 592 aa17.45■□□□□ 0.38
HMGN3-201ENST00000275036 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
HMGN3-201ENST00000275036 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
HMGN3-201ENST00000275036 CRNKL1Q9BZJ0 848 aaKnown RBP17.45■□□□□ 0.38
HMGN3-201ENST00000275036 MYPNQ86TC9 1320 aa17.45■□□□□ 0.38
HMGN3-201ENST00000275036 PRKAB2O43741 272 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 MBD4O95243 580 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 BACE1P56817 501 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
HMGN3-201ENST00000275036 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.389e-10■■□□□ 12.3
HMGN3-201ENST00000275036 EHD4Q9H223 541 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
HMGN3-201ENST00000275036 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
HMGN3-201ENST00000275036 PEX10O60683 326 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 GH2P01242 217 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 SHMT1P34896 483 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 PRMT2P55345 433 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 FCGRTP55899 365 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 UBE3CQ15386 1083 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 MTFR1Q15390 333 aa17.43■□□□□ 0.38
HMGN3-201ENST00000275036 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
HMGN3-201ENST00000275036 SMIM22K7EJ46 135 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 CYP2D6P10635 497 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 GABPAQ06546 454 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
HMGN3-201ENST00000275036 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 SALL3Q9BXA9 1300 aa17.42■□□□□ 0.38
HMGN3-201ENST00000275036 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
HMGN3-201ENST00000275036 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
HMGN3-201ENST00000275036 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
HMGN3-201ENST00000275036 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
HMGN3-201ENST00000275036 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
HMGN3-201ENST00000275036 GRK4P32298 578 aa17.4■□□□□ 0.38
HMGN3-201ENST00000275036 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
HMGN3-201ENST00000275036 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
HMGN3-201ENST00000275036 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
HMGN3-201ENST00000275036 HOXD10P28358 340 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-201ENST00000275036 FLT3LGP49771 235 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-201ENST00000275036 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 SLC44A5Q8NCS7 719 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 TXNRD2Q9NNW7 524 aa17.39■□□□□ 0.37
HMGN3-201ENST00000275036 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 C19orf81C9J6K1 198 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 ELNP15502 786 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
HMGN3-201ENST00000275036 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
HMGN3-201ENST00000275036 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
HMGN3-201ENST00000275036 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 ATP8A2Q9NTI2 1148 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
HMGN3-201ENST00000275036 MX1P20591 662 aa17.37■□□□□ 0.37
HMGN3-201ENST00000275036 GCLCP48506 637 aaPredicted RBP17.37■□□□□ 0.37
HMGN3-201ENST00000275036 RAB3GAP1Q15042 981 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms