RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
USP53-201ENST00000274030 FAM204AQ9H8W3 233 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 H0YIN7 160 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 CEP104O60308 925 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 SORBS3O60504 671 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 GTF2IP78347 998 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 LRMPQ12912 555 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 CABP7Q86V35 215 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
USP53-201ENST00000274030 FAM207AQ9NSI2 230 aaPredicted RBP12.78□□□□□ -0.36
USP53-201ENST00000274030 USP17L12C9JPN9 530 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 USP17L21D6R901 530 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 NLRP12P59046 1061 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 GEN1Q17RS7 908 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 MLKLQ8NB16 471 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.36
USP53-201ENST00000274030 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 KRT19P08727 400 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 HOXB7P09629 217 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.36
USP53-201ENST00000274030 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.36
USP53-201ENST00000274030 MAGEA1P43355 309 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 SDR42E1Q8WUS8 393 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 NKIRAS1Q9NYS0 192 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 CD19P15391 556 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 GYG1P46976 350 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 PTH1RQ03431 593 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 ELF2Q15723 593 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 DAPK3O43293 454 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 KRT25Q7Z3Z0 450 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
USP53-201ENST00000274030 SECISBP2LQ93073 1101 aaKnown RBP12.77□□□□□ -0.37
USP53-201ENST00000274030 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 GDAP1L1Q96MZ0 367 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
USP53-201ENST00000274030 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
USP53-201ENST00000274030 MYO1AQ9UBC5 1043 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 IVNS1ABPQ9Y6Y0 642 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 PPP1R2P41236 205 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 SETDB1Q15047 1291 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 SPATA24Q86W54 205 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
USP53-201ENST00000274030 SNX16P57768 344 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 CCDC14Q49A88 953 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 ADKP55263 362 aaKnown RBP12.76□□□□□ -0.37
USP53-201ENST00000274030 SLC8A3P57103 927 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 PPARAQ07869 468 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 PTPROQ16827 1216 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
USP53-201ENST00000274030 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 TRIM14Q14142 442 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 PPANQ9NQ55 473 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 ASIC3Q9UHC3 531 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 SMCO2A6NFE2 343 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 HSPA1LP34931 641 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 REXO1Q8N1G1 1221 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 FRMPD2Q68DX3 1309 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 TUBB4BP68371 445 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 DCUN1D2Q6PH85 259 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 BCAMP50895 628 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 GTF2A1P52655 376 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 PPP2R5CQ13362 524 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 RRAGDQ9NQL2 400 aaPredicted RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
USP53-201ENST00000274030 AOX1Q06278 1338 aa12.75□□□□□ -0.37
USP53-201ENST00000274030 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms