RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 ZSCAN22P10073 491 aaPredicted RBP13.96□□□□□ -0.17
CDH11-201ENST00000268603 VWA3BQ502W6 1294 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 LMBR1LQ6UX01 489 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 SPTLC2O15270 562 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 HAUS3Q68CZ6 603 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 HDXQ7Z353 690 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 CNGA4Q8IV77 575 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
CDH11-201ENST00000268603 H0YIN7 160 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 IRS4O14654 1257 aaPredicted RBP13.96□□□□□ -0.18
CDH11-201ENST00000268603 OPHN1O60890 802 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 CAMSAP2Q08AD1 1489 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 SDCCAG3Q96C92 435 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 FAM8A1Q9UBU6 413 aa13.96□□□□□ -0.18
CDH11-201ENST00000268603 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
CDH11-201ENST00000268603 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
CDH11-201ENST00000268603 GOLGA8CPA6NN73 597 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 GCNT3O95395 438 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 TXKP42681 527 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 NME8Q8N427 588 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
CDH11-201ENST00000268603 CAVIN2O95810 425 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 CNBD1Q8NA66 436 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
CDH11-201ENST00000268603 H7C1D1 291 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 SYF2O95926 243 aaKnown RBP13.94□□□□□ -0.18
CDH11-201ENST00000268603 LRMPQ12912 555 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDH11-201ENST00000268603 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 APOL6Q9BWW8 343 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 CDK13Q14004 1512 aaKnown RBP13.94□□□□□ -0.18
CDH11-201ENST00000268603 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 CCDC93Q567U6 631 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 NUB1Q9Y5A7 615 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 NVLO15381 856 aaKnown RBP13.94□□□□□ -0.18
CDH11-201ENST00000268603 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 BCAP29Q9UHQ4 241 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 CFBP00751 764 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 ATICP31939 592 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 IQUBQ8NA54 791 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 MCUQ8NE86 351 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 MAPK8IP1Q9UQF2 711 aa13.94□□□□□ -0.18
CDH11-201ENST00000268603 DBN1Q16643 649 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 CADPS2Q86UW7 1296 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 N4BP2L2Q92802 583 aaPredicted RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 IPO11Q9UI26 975 aaKnown RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 FAF1Q9UNN5 650 aaPredicted RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 EXOC3O60645 756 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 KRT12Q99456 494 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 VPS16Q9H269 839 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 STK38LQ9Y2H1 464 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 INPP5BP32019 993 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 VPS41P49754 854 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 ARPP19P56211 112 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 IGBP1P78318 339 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 PDCD2Q16342 344 aaPredicted RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 MMEL1Q495T6 779 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 CNNM4Q6P4Q7 775 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 ATP6V1E2Q96A05 226 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 SMYD2Q9NRG4 433 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 BLVRAP53004 296 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 SLC9A5Q14940 896 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 IQCB1Q15051 598 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 MUM1Q2TAK8 710 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 MRPL44Q9H9J2 332 aaKnown RBP13.93□□□□□ -0.18
CDH11-201ENST00000268603 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 ARHGAP44Q17R89 818 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 KSR1Q8IVT5 923 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
CDH11-201ENST00000268603 NDUFAB1O14561 156 aa13.92□□□□□ -0.18
CDH11-201ENST00000268603 HEXIM1O94992 359 aaKnown RBP13.92□□□□□ -0.18
CDH11-201ENST00000268603 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
CDH11-201ENST00000268603 ECE1P42892 770 aa13.92□□□□□ -0.18
CDH11-201ENST00000268603 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
CDH11-201ENST00000268603 FAM102BQ5T8I3 360 aa13.92□□□□□ -0.18
CDH11-201ENST00000268603 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms