RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 BIRC2Q13490 618 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 CD2APQ9Y5K6 639 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 PCYT1AP49585 367 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 EXOC5O00471 708 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 DHX32Q7L7V1 743 aaKnown RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 CCDC105Q8IYK2 499 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 MED4Q9NPJ6 270 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 BACH1O14867 736 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 CCDC92Q53HC0 331 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 RIOK1Q9BRS2 568 aaKnown RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 NACA2Q9H009 215 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 PEX26Q7Z412 305 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 PAK1Q13153 545 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 MGARPQ8TDB4 240 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 TRIM60Q495X7 471 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 CFAP61Q8NHU2 1237 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 CAPS2Q9BXY5 557 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 VWA3AA6NCI4 1184 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
SRRM4-201ENST00000267260 PDE1AP54750 535 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 IWS1Q96ST2 819 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 GIMAP4Q9NUV9 329 aa13.35□□□□□ -0.27
SRRM4-201ENST00000267260 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 STX17P56962 302 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 EFCAB13Q8IY85 973 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 TRIM56Q9BRZ2 755 aaKnown RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 RPS6KA1Q15418 735 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 ARHGEF9O43307 516 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 PALMDQ9NP74 551 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 FRMD3A2A2Y4 597 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 JADE1Q6IE81 842 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 CTNNA1P35221 906 aaKnown RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 TNNI2P48788 182 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 HACE1Q8IYU2 909 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 PAWRQ96IZ0 340 aaKnown RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
SRRM4-201ENST00000267260 FAM8A1Q9UBU6 413 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
SRRM4-201ENST00000267260 MMEL1Q495T6 779 aa13.33□□□□□ -0.27
SRRM4-201ENST00000267260 SMC5Q8IY18 1101 aa13.33□□□□□ -0.27
SRRM4-201ENST00000267260 TRIM58Q8NG06 486 aa13.33□□□□□ -0.27
SRRM4-201ENST00000267260 E9PMD0 336 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 TRIM31Q9BZY9 425 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
SRRM4-201ENST00000267260 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
SRRM4-201ENST00000267260 DAAM1Q9Y4D1 1078 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 GNGT1P63211 74 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 CREB3L3Q68CJ9 461 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
SRRM4-201ENST00000267260 EIF3CLB5ME19 914 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 PDE4DQ08499 809 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 EIF3CQ99613 913 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 YY1AP1Q9H869 796 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 RIC8AQ9NPQ8 531 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 AMFRQ9UKV5 643 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 DEXIO95424 95 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 CTAGE3PQ8IX95 158 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 SERPINI2O75830 405 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms