RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PDE4DQ08499 809 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 LRWD1Q9UFC0 647 aa17.33■□□□□ 0.37
TIMP3-201ENST00000266085 CBX1P83916 185 aa17.33■□□□□ 0.36
TIMP3-201ENST00000266085 KIAA0753Q2KHM9 967 aa17.33■□□□□ 0.36
TIMP3-201ENST00000266085 UIMC1Q96RL1 719 aa17.33■□□□□ 0.36
TIMP3-201ENST00000266085 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.36
TIMP3-201ENST00000266085 GOLGA6L10A0A0M3HER8 536 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 PFKFB2O60825 505 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 ZNF445P59923 1031 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 POLA2Q14181 598 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 USP31Q70CQ4 1352 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 MLKLQ8NB16 471 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 ERICH4A6NGS2 130 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 NCAPD2Q15021 1401 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 SEMA3EO15041 775 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 POLR3GO15318 223 aaPredicted RBP17.32■□□□□ 0.36
TIMP3-201ENST00000266085 SRRTQ9BXP5 876 aaKnown RBP17.32■□□□□ 0.36
TIMP3-201ENST00000266085 ATP8A2Q9NTI2 1148 aa17.32■□□□□ 0.36
TIMP3-201ENST00000266085 TNS3Q68CZ2 1445 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 SYNCQ9H7C4 482 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 CTAGE9A4FU28 777 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
TIMP3-201ENST00000266085 ACTN2P35609 894 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 TNFAIP1Q13829 316 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 BMS1Q14692 1282 aaKnown RBP17.31■□□□□ 0.36
TIMP3-201ENST00000266085 SNX29Q8TEQ0 813 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 PNPLA6Q8IY17 1366 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
TIMP3-201ENST00000266085 MYZAPP0CAP1 466 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
TIMP3-201ENST00000266085 TBC1D8BQ0IIM8 1120 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 CNNM4Q6P4Q7 775 aa17.31■□□□□ 0.36
TIMP3-201ENST00000266085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.36
TIMP3-201ENST00000266085 SMCO2A6NFE2 343 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 PRPHP41219 470 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 BCCIPQ9P287 314 aaKnown RBP eCLIP17.3■□□□□ 0.36
TIMP3-201ENST00000266085 E9PCH4 1651 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 TCP10L2B9ZVM9 353 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 CLEC4GQ6UXB4 293 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 LMTK2Q8IWU2 1503 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 STAMQ92783 540 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 LZTFL1Q9NQ48 299 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 MADDQ8WXG6 1647 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 LRRC47Q8N1G4 583 aaKnown RBP17.3■□□□□ 0.36
TIMP3-201ENST00000266085 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
TIMP3-201ENST00000266085 ADCY9O60503 1353 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 CEP152O94986 1710 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 SLU7O95391 586 aaKnown RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 GOLGA8HP0CJ92 632 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 PDIA3P30101 505 aaKnown RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 ARFGAP3Q9NP61 516 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 GUCA1BQ9UMX6 200 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 ZBED4O75132 1171 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 ADD2P35612 726 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 USP28Q96RU2 1077 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 AKR1B15C9JRZ8 316 aaPredicted RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 DYNLL1P63167 89 aaKnown RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 PKP1Q13835 747 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
TIMP3-201ENST00000266085 LMBR1Q8WVP7 490 aa17.29■□□□□ 0.36
TIMP3-201ENST00000266085 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
TIMP3-201ENST00000266085 NOC4LQ9BVI4 516 aaKnown RBP17.28■□□□□ 0.36
TIMP3-201ENST00000266085 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
TIMP3-201ENST00000266085 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
TIMP3-201ENST00000266085 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CHURC1Q8WUH1 139 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 VPS16Q9H269 839 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 NCBP1Q09161 790 aaKnown RBP17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CALCRLQ16602 461 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 NOSTRINQ8IVI9 506 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 DBNDD1Q9H9R9 158 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 AFF2P51816 1311 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CBX8Q9HC52 389 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
TIMP3-201ENST00000266085 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 ADALQ6DHV7 355 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 PUS7LQ9H0K6 701 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms