RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
SSBP1-201ENST00000265304 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
SSBP1-201ENST00000265304 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
SSBP1-201ENST00000265304 TCP11L1Q9NUJ3 509 aa16.93■□□□□ 0.3
SSBP1-201ENST00000265304 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
SSBP1-201ENST00000265304 IGKV6D-41A0A0C4DH26 115 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 ASNSP08243 561 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 INPP5BP32019 993 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 ANAPC15P60006 121 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 HAND2P61296 217 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 JAG1P78504 1218 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
SSBP1-201ENST00000265304 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 WRNIP1Q96S55 665 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 TAF6LQ9Y6J9 622 aa16.92■□□□□ 0.3
SSBP1-201ENST00000265304 E7EWF7 191 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 VGLL4Q14135 290 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 MTA3Q9BTC8 594 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 TBC1D2Q9BYX2 928 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 FZD1Q9UP38 647 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 MYH4Q9Y623 1939 aa16.91■□□□□ 0.3
SSBP1-201ENST00000265304 SPDYE5A6NIY4 337 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 KRT32Q14532 448 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 ZNF444Q8N0Y2 327 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-201ENST00000265304 NKX2-3Q8TAU0 364 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 ZKSCAN4Q969J2 545 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-201ENST00000265304 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 KRT23Q9C075 422 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 ZBTB21Q9ULJ3 1066 aa16.9■□□□□ 0.3
SSBP1-201ENST00000265304 AKR1B1P15121 316 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
SSBP1-201ENST00000265304 PTPRAP18433 802 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
SSBP1-201ENST00000265304 PPATQ06203 517 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 MKL1Q969V6 931 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 ZNF408Q9H9D4 720 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 SYNPO2Q9UMS6 1093 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 NEDD4P46934 1319 aa16.89■□□□□ 0.29
SSBP1-201ENST00000265304 HUNKP57058 714 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 PRKG1Q13976 671 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 MB21D2Q8IYB1 491 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-201ENST00000265304 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 ESR2Q92731 530 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 KANSL2Q9H9L4 492 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 ZSWIM5Q9P217 1185 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 KCNH4Q9UQ05 1017 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 CSADQ9Y600 493 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
SSBP1-201ENST00000265304 USP17L5A8MUK1 530 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 PRDM1O75626 825 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 GH2P01242 217 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-201ENST00000265304 TFAP4Q01664 338 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
SSBP1-201ENST00000265304 TTLL12Q14166 644 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-201ENST00000265304 PPP4R3BQ5MIZ7 849 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 SLC10A4Q96EP9 437 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 TTC14Q96N46 770 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 CABP5Q9NP86 173 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
SSBP1-201ENST00000265304 FAM155AB1AL88 458 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-201ENST00000265304 CXCL11O14625 94 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
SSBP1-201ENST00000265304 HSPA6P17066 643 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 MCCP23508 829 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 PPIL2Q13356 520 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-201ENST00000265304 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 PICK1Q9NRD5 415 aa16.86■□□□□ 0.29
SSBP1-201ENST00000265304 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms