RNA–Protein interactions for RNA: ENST00000265295.8

SPDL1-201, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDL1, Length 2,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-201ENST00000265295 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
SPDL1-201ENST00000265295 MCM9Q9NXL9 1143 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 ARFGEF1Q9Y6D6 1849 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 IDI2Q9BXS1 227 aa13.36□□□□□ -0.27
SPDL1-201ENST00000265295 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
SPDL1-201ENST00000265295 GRM4Q14833 912 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 DAGLAQ9Y4D2 1042 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 FLT1P17948 1338 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 SIPA1L1O43166 1804 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 GOLGA6L4A6NEF3 574 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
SPDL1-201ENST00000265295 MMP1P03956 469 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 XRCC6P12956 609 aaKnown RBP eCLIP13.35□□□□□ -0.27
SPDL1-201ENST00000265295 GABPAQ06546 454 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 HS1BP3Q53T59 392 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 KRT40Q6A162 431 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
SPDL1-201ENST00000265295 TEKT1Q969V4 418 aa13.35□□□□□ -0.27
SPDL1-201ENST00000265295 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
SPDL1-201ENST00000265295 FIBPO43427 364 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
SPDL1-201ENST00000265295 TRAPPC10P48553 1259 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 RILPL1Q5EBL4 403 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CCDC17Q96LX7 622 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CLSTN2Q9H4D0 955 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
SPDL1-201ENST00000265295 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
SPDL1-201ENST00000265295 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 RCSD1Q6JBY9 416 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 POLR3DP05423 398 aaPredicted RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 GTF2IP78347 998 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 ORC2Q13416 577 aaPredicted RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 RRP12Q5JTH9 1297 aaKnown RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
SPDL1-201ENST00000265295 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
SPDL1-201ENST00000265295 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 ENTPD3O75355 529 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 RASA1P20936 1047 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 CALML3P27482 149 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
SPDL1-201ENST00000265295 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 MTMR14Q8NCE2 650 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 BRMS1Q9HCU9 246 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 TOMM22Q9NS69 142 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 EP400Q96L91 3159 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 CMA1P23946 247 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 GAS2L3Q86XJ1 694 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
SPDL1-201ENST00000265295 CNTNAP5Q8WYK1 1306 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 TOP1P11387 765 aaKnown RBP13.31□□□□□ -0.28
SPDL1-201ENST00000265295 CDK8P49336 464 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 TGFBRAP1Q8WUH2 860 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
SPDL1-201ENST00000265295 NUP62CLQ9H1M0 184 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 SENP2Q9HC62 589 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 G3V3G9 751 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 CUTAO60888 179 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 TFAP4Q01664 338 aa13.31□□□□□ -0.28
SPDL1-201ENST00000265295 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms