RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 SOS2Q07890 1332 aaPredicted RBP6.03□□□□□ -1.44
XRN1-201ENST00000264951 NUTM2BA6NNL0 878 aaPredicted RBP6.03□□□□□ -1.44
XRN1-201ENST00000264951 NUTM2EB1AL46 878 aaPredicted RBP6.03□□□□□ -1.44
XRN1-201ENST00000264951 ZPR1O75312 459 aa6.03□□□□□ -1.44
XRN1-201ENST00000264951 PSMD6Q15008 389 aa6.03□□□□□ -1.44
XRN1-201ENST00000264951 TAF11Q15544 211 aa6.03□□□□□ -1.44
XRN1-201ENST00000264951 KLF18A0A0U1RQI7 1052 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 NR1H3Q13133 447 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 MCMDC2Q4G0Z9 681 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 UPF3AQ9H1J1 476 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 BOLA2Q9H3K6 86 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 TFIP11Q9UBB9 837 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 PTGS1P23219 599 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PEX26Q7Z412 305 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 SAAL1Q96ER3 474 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 STAMBPL1Q96FJ0 436 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 MAD1L1Q9Y6D9 718 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 APOA1P02647 267 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 CDR2Q01850 454 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 ARHGEF18Q6ZSZ5 1173 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 WWC3Q9ULE0 1092 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 EXOC5O00471 708 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PPP1R12AO14974 1030 aaPredicted RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 CUTAO60888 179 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 RAPGEF1Q13905 1077 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 BRDTQ58F21 947 aaPredicted RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 NOC4LQ9BVI4 516 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 DDX21Q9NR30 783 aaKnown RBP eCLIP6.02□□□□□ -1.45
XRN1-201ENST00000264951 EEF1DP29692 281 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 NBPF20Q3BBV1 942 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PRPF38AQ8NAV1 312 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 OR9Q1Q8NGQ5 310 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 GOLGA8MH3BSY2 632 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 STX1BP61266 288 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 ASIC2Q16515 512 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 CCDC105Q8IYK2 499 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 LRRC43Q8N309 656 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 FNBP1Q96RU3 617 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 SH3GL3Q99963 347 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 TPX2Q9ULW0 747 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 HYOU1Q9Y4L1 999 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PASKQ96RG2 1323 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 HNRNPCL1O60812 293 aaKnown RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 C4BPBP20851 252 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 MMS22LQ6ZRQ5 1243 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PPP1R42Q7Z4L9 355 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 TTC25Q96NG3 672 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 LRRC37BQ96QE4 947 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 TRIM6Q9C030 488 aaPredicted RBP6.02□□□□□ -1.45
XRN1-201ENST00000264951 ANKIB1Q9P2G1 1089 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 CCDC61Q9Y6R9 512 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 SYNRGQ9UMZ2 1314 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 CCDC78A2IDD5 438 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 GRAMD4Q6IC98 578 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 KRT80Q6KB66 452 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 ANKRD35Q8N283 1001 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 PHKBQ93100 1093 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 ZRANB1Q9UGI0 708 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 AMFRQ9UKV5 643 aa6.02□□□□□ -1.45
XRN1-201ENST00000264951 MAP3K7O43318 606 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 IL15P40933 162 aaPredicted RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 TAF12Q16514 161 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 JADE1Q6IE81 842 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 TSC22D3Q99576 134 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 POLR3CQ9BUI4 534 aaPredicted RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 NAPAP54920 295 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 TMTC3Q6ZXV5 915 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 CATSPER1Q8NEC5 780 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 BCAS4Q8TDM0 211 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 ZFP91Q96JP5 570 aaPredicted RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 NOP53Q9NZM5 478 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 ARHGAP26Q9UNA1 814 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 POGZQ7Z3K3 1410 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 CCDC151A5D8V7 595 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 DHX32Q7L7V1 743 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 GIPC2Q8TF65 315 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 BRF1Q92994 677 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 CABP2Q9NPB3 220 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 BATF3Q9NR55 127 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 STOML1Q9UBI4 398 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 TSPY3P0CV98 308 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 TSPY8P0CW00 308 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 LONP1P36776 959 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 LRRC8CQ8TDW0 803 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 TRPC6Q9Y210 931 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 HARSP12081 509 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 KRT5P13647 590 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 PRIM1P49642 420 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 UAP1Q16222 522 aaPredicted RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 MRFAP1L1Q96HT8 127 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 TMEM87BQ96K49 555 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 IFIH1Q9BYX4 1025 aaKnown RBP6.01□□□□□ -1.45
XRN1-201ENST00000264951 NT5C3AQ9H0P0 336 aa6.01□□□□□ -1.45
XRN1-201ENST00000264951 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms