RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 HYOU1Q9Y4L1 999 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 EIF3CLB5ME19 914 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 PPP6R2O75170 966 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 EIF3CQ99613 913 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 PLEKHG1Q9ULL1 1385 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 IFT81Q8WYA0 676 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 PPLO60437 1756 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 ANKRD62A6NC57 917 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 GNGT1P63211 74 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 SPATA1Q5VX52 437 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 TMX1Q9H3N1 280 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 SEPT6Q14141 434 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 ISM2Q6H9L7 571 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 RUNDC3BQ96NL0 473 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 VCX3BQ9H321 246 aa13.02□□□□□ -0.32
DNMT3A-201ENST00000264709 H7C1D1 291 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 NT5C2P49902 561 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 TBC1D8BQ0IIM8 1120 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 MYD88Q99836 296 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 USP44Q9H0E7 712 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 LIG3P49916 1009 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 MYOM1P52179 1685 aa13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-201ENST00000264709 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 TRIM37O94972 964 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 SSBP05455 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 FYB2Q5VWT5 728 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 ACEP12821 1306 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 RPL13P26373 211 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 BIRC3Q13489 604 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 CEP120Q8N960 986 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 ANO9A1A5B4 782 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 DENND2CQ68D51 928 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 DHX58Q96C10 678 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 E7EVH7 732 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 NEBLO76041 1014 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 TRAF1Q13077 416 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 CUL1Q13616 776 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 TNIP1Q15025 636 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 EIF3BP55884 814 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
DNMT3A-201ENST00000264709 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 CUEDC2Q9H467 287 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 IRX4P78413 519 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 CSRNP2Q9H175 543 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
DNMT3A-201ENST00000264709 GNA14O95837 355 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 TRAPPC10P48553 1259 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 EPN1Q9Y6I3 576 aaPredicted RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 SPTY2D1Q68D10 685 aaPredicted RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 PDE6BP35913 854 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 PLCB4Q15147 1175 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 APLFQ8IW19 511 aaPredicted RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 TEX2Q8IWB9 1127 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 UBLCP1Q8WVY7 318 aaPredicted RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 PRPF4BQ13523 1007 aaKnown RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
DNMT3A-201ENST00000264709 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
DNMT3A-201ENST00000264709 CCT6AP40227 531 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 HAND2P61296 217 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 ST5P78524 1137 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 KRT71Q3SY84 523 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 CEP63Q96MT8 703 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms