RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 FRMD4BQ9Y2L6 1034 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 STAMQ92783 540 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 EPB41P11171 864 aaKnown RBP15.69■□□□□ 0.1
CDH3-201ENST00000264012 FSD2A1L4K1 749 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 TRIM14Q14142 442 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 CALCRLQ16602 461 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
CDH3-201ENST00000264012 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
CDH3-201ENST00000264012 CYP21A2P08686 494 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 PDE6BP35913 854 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 NCAPH2Q6IBW4 605 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 CALRP27797 417 aaKnown RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 ZNF589Q86UQ0 364 aaPredicted RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 DHX37Q8IY37 1157 aaKnown RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 USH1GQ495M9 461 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 ZHX1Q9UKY1 873 aaPredicted RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 CETN3O15182 167 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 HERC4Q5GLZ8 1057 aaPredicted RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
CDH3-201ENST00000264012 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
CDH3-201ENST00000264012 PFKFB1P16118 471 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 PTPN12Q05209 780 aaKnown RBP15.67■□□□□ 0.1
CDH3-201ENST00000264012 CPSF1Q10570 1443 aaKnown RBP15.67■□□□□ 0.1
CDH3-201ENST00000264012 ZNF804BA4D1E1 1349 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 SMCO2A6NFE2 343 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 TMEM110-MUSTN1A8MSY1 372 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 TUBB4BP68371 445 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 CABP7Q86V35 215 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 FERMT1Q9BQL6 677 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 SERTAD1Q9UHV2 236 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 RASAL2Q9UJF2 1139 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 PTCH1Q13635 1447 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 NR1I2O75469 434 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 GJC1P36383 396 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 SCRN1Q12765 414 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 ANTXR1Q9H6X2 564 aa15.67■□□□□ 0.1
CDH3-201ENST00000264012 PNOCQ13519 176 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 MICALCLQ6ZW33 695 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 TMOD4Q9NZQ9 345 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 KIAA1468Q9P260 1216 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 ARHGEF35A5YM69 484 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 CFBP00751 764 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 EEF2P13639 858 aaKnown RBP15.66■□□□□ 0.1
CDH3-201ENST00000264012 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
CDH3-201ENST00000264012 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
CDH3-201ENST00000264012 POLA2Q14181 598 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 FMNL3Q8IVF7 1028 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 TRMT44Q8IYL2 757 aaKnown RBP15.66■□□□□ 0.1
CDH3-201ENST00000264012 CCDC155Q8N6L0 562 aa15.66■□□□□ 0.1
CDH3-201ENST00000264012 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 NCBP1Q09161 790 aaKnown RBP15.65■□□□□ 0.1
CDH3-201ENST00000264012 PIGBQ92521 554 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 BLZF1Q9H2G9 400 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 DNM3Q9UQ16 869 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 NIM1KQ8IY84 436 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 BLIDQ8IZY5 108 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 BIN2Q9UBW5 565 aaPredicted RBP15.65■□□□□ 0.1
CDH3-201ENST00000264012 CCDC169A6NNP5 214 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 RHOXF2BP0C7M4 288 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 SMTNP53814 917 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 RHOXF2Q9BQY4 288 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 TSGA10Q9BZW7 698 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 BTDP43251 543 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 CYP26C1Q6V0L0 522 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
CDH3-201ENST00000264012 SASH1O94885 1247 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 MYCLP12524 364 aaPredicted RBP15.64■□□□□ 0.09
CDH3-201ENST00000264012 GRM1Q13255 1194 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 RNF17Q9BXT8 1623 aaKnown RBP15.64■□□□□ 0.09
CDH3-201ENST00000264012 NSMFQ6X4W1 530 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 STK24Q9Y6E0 443 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 CYP27B1O15528 508 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 KRT9P35527 623 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 VWA3BQ502W6 1294 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 NELFBQ8WX92 580 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 PLCD4Q9BRC7 762 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 UNC13BO14795 1591 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms