RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NBPF3Q9H094 633 aa21.84■■□□□ 1.09
SDF4-201ENST00000263741 TACC3Q9Y6A5 838 aa21.84■■□□□ 1.09
SDF4-201ENST00000263741 SLC10A3P09131 477 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 CAP2P40123 477 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 TATDN1Q6P1N9 297 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 OPTNQ96CV9 577 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 HHIPL1Q96JK4 782 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 ANO2Q9NQ90 1003 aa21.83■■□□□ 1.09
SDF4-201ENST00000263741 WNK4Q96J92 1243 aa21.83■■□□□ 1.08
SDF4-201ENST00000263741 ZMYM6O95789 1325 aa21.82■■□□□ 1.08
SDF4-201ENST00000263741 CTNND1O60716 968 aaKnown RBP21.82■■□□□ 1.08
SDF4-201ENST00000263741 CERKLQ49MI3 558 aaPredicted RBP21.82■■□□□ 1.08
SDF4-201ENST00000263741 NOL9Q5SY16 702 aaKnown RBP21.82■■□□□ 1.08
SDF4-201ENST00000263741 LSG1Q9H089 658 aaKnown RBP21.82■■□□□ 1.08
SDF4-201ENST00000263741 MYH4Q9Y623 1939 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 GH2P01242 217 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 AKR1B1P15121 316 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 CLEC10AQ8IUN9 316 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 TBC1D10CQ8IV04 446 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 PICK1Q9NRD5 415 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 ZBTB21Q9ULJ3 1066 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 WDR33Q9C0J8 1336 aaKnown RBP21.81■■□□□ 1.08
SDF4-201ENST00000263741 SPDYE5A6NIY4 337 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 MPHOSPH10O00566 681 aaKnown RBP21.81■■□□□ 1.08
SDF4-201ENST00000263741 SWAP70Q9UH65 585 aa21.81■■□□□ 1.08
SDF4-201ENST00000263741 SPRYD7Q5W111 196 aa21.8■■□□□ 1.08
SDF4-201ENST00000263741 KIAA1211Q6ZU35 1233 aa21.8■■□□□ 1.08
SDF4-201ENST00000263741 DNAJC5GQ8N7S2 189 aa21.8■■□□□ 1.08
SDF4-201ENST00000263741 PTPRAP18433 802 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 ABCB5Q2M3G0 1257 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 RBM8AQ9Y5S9 174 aaKnown RBP21.79■■□□□ 1.08
SDF4-201ENST00000263741 TAF6LQ9Y6J9 622 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 RASA1P20936 1047 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 ERO1BQ86YB8 467 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 MKNK2Q9HBH9 465 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
SDF4-201ENST00000263741 RAB3GAP1Q15042 981 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 ANAPC4Q9UJX5 808 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 IRF6O14896 467 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 ECE1P42892 770 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 TOMM22Q9NS69 142 aa21.78■■□□□ 1.08
SDF4-201ENST00000263741 NEDD4P46934 1319 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 UNCXA6NJT0 531 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 ZNF213O14771 459 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 ASNSP08243 561 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 GUCY1A2P33402 732 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 SEPT2Q15019 361 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
SDF4-201ENST00000263741 MAP4K1Q92918 833 aa21.77■■□□□ 1.08
SDF4-201ENST00000263741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.77■■□□□ 1.081e-6■■■■□ 25.3
SDF4-201ENST00000263741 TRIM75PA6NK02 468 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 SLC3A2P08195 630 aaKnown RBP21.76■■□□□ 1.07
SDF4-201ENST00000263741 DGKZQ13574 1117 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 IMMTQ16891 758 aaKnown RBP21.76■■□□□ 1.07
SDF4-201ENST00000263741 FAM47AQ5JRC9 791 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 U3KPZ7 1027 aaPredicted RBP21.76■■□□□ 1.07
SDF4-201ENST00000263741 LOC285556D6RIA3 1793 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 CYP21A2P08686 494 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 KIF23Q02241 960 aaPredicted RBP21.76■■□□□ 1.07
SDF4-201ENST00000263741 PDE4BQ07343 736 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 CTNNA3Q9UI47 895 aa21.76■■□□□ 1.07
SDF4-201ENST00000263741 NOGQ13253 232 aa21.75■■□□□ 1.07
SDF4-201ENST00000263741 PPIL2Q13356 520 aa21.75■■□□□ 1.07
SDF4-201ENST00000263741 ZBTB48P10074 688 aaPredicted RBP21.75■■□□□ 1.07
SDF4-201ENST00000263741 PPATQ06203 517 aa21.75■■□□□ 1.07
SDF4-201ENST00000263741 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.75■■□□□ 1.07
SDF4-201ENST00000263741 CABP5Q9NP86 173 aa21.75■■□□□ 1.07
SDF4-201ENST00000263741 USP17L5A8MUK1 530 aa21.74■■□□□ 1.07
SDF4-201ENST00000263741 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
SDF4-201ENST00000263741 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
SDF4-201ENST00000263741 SPP2Q13103 211 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 ZNF444Q8N0Y2 327 aaPredicted RBP21.73■■□□□ 1.07
SDF4-201ENST00000263741 STAG1Q8WVM7 1258 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 AFG3L2Q9Y4W6 797 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 ANP32AP39687 249 aaKnown RBP21.73■■□□□ 1.07
SDF4-201ENST00000263741 MFSD6Q6ZSS7 791 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 TMEM179Q6ZVK1 233 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 ACER1Q8TDN7 264 aa21.73■■□□□ 1.07
SDF4-201ENST00000263741 TFAP4Q01664 338 aa21.72■■□□□ 1.07
SDF4-201ENST00000263741 ZYXQ15942 572 aaKnown RBP21.72■■□□□ 1.07
SDF4-201ENST00000263741 STOX1Q6ZVD7 989 aa21.72■■□□□ 1.07
SDF4-201ENST00000263741 MS4A4AQ96JQ5 239 aa21.72■■□□□ 1.07
SDF4-201ENST00000263741 CCDC17Q96LX7 622 aa21.72■■□□□ 1.07
SDF4-201ENST00000263741 ZNF287Q9HBT7 754 aa21.72■■□□□ 1.07
SDF4-201ENST00000263741 NMT2O60551 498 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 TSPY3P0CV98 308 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 TSPY8P0CW00 308 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 MTMR2Q13614 643 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 ZNF280CQ8ND82 737 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 B4E1Z4 1266 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 SLC27A2O14975 620 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 ORC4O43929 436 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 FGRP09769 529 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 ATP2B2Q01814 1243 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 ICA1Q05084 483 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 BRI3BPQ8WY22 251 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
SDF4-201ENST00000263741 CCL15-CCL14A0A0B4J2E2 113 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms