RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 GOLGA6L19H0YKK7 550 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 GRAPQ13588 217 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-201ENST00000263401 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 GRAPLQ8TC17 118 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-201ENST00000263401 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 GYS1P13807 737 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 NOLC1Q14978 699 aaKnown RBP eCLIP12.06□□□□□ -0.48
COMMD9-201ENST00000263401 PKN1Q16512 942 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 CTAGE5O15320 804 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
COMMD9-201ENST00000263401 CMA1P23946 247 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 SYKP43405 635 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 PDILTQ8N807 584 aa12.06□□□□□ -0.48
COMMD9-201ENST00000263401 CRNKL1Q9BZJ0 848 aaKnown RBP12.06□□□□□ -0.48
COMMD9-201ENST00000263401 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 STK36Q9NRP7 1315 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 UFL1O94874 794 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 TPM2P07951 284 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 TSC1Q92574 1164 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
COMMD9-201ENST00000263401 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 DEXIO95424 95 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 DDR1Q08345 913 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 FUT2Q10981 343 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 TROAPQ12815 778 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 HSP90AA4PQ58FG1 418 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 QTRT2Q9H974 415 aaKnown RBP12.05□□□□□ -0.48
COMMD9-201ENST00000263401 ANO10Q9NW15 660 aa12.05□□□□□ -0.48
COMMD9-201ENST00000263401 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 SERPINB2P05120 415 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
COMMD9-201ENST00000263401 USP5P45974 858 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 SRBD1Q8N5C6 995 aaKnown RBP12.04□□□□□ -0.48
COMMD9-201ENST00000263401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD9-201ENST00000263401 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 SAFBQ15424 915 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD9-201ENST00000263401 FILIP1Q7Z7B0 1213 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
COMMD9-201ENST00000263401 PLCD1P51178 756 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 METTL16Q86W50 562 aaKnown RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 SEMA3EO15041 775 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 NID2Q14112 1375 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 CASP1P29466 404 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 TFAP4Q01664 338 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
COMMD9-201ENST00000263401 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 KCNH3Q9ULD8 1083 aa12.03□□□□□ -0.48
COMMD9-201ENST00000263401 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 PPP6R2O75170 966 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 ATP1A3P13637 1013 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 XDHP47989 1333 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 PROM2Q8N271 834 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 WASF1Q92558 559 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 LAMB1P07942 1786 aa12.02□□□□□ -0.49
COMMD9-201ENST00000263401 F8W031 263 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 LMOD1P29536 600 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-201ENST00000263401 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 UQCRHLA0A096LP55 91 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 UQCRHP07919 91 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 FGRP09769 529 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 ZNF174Q15697 407 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 BRWD3Q6RI45 1802 aa12.01□□□□□ -0.49
COMMD9-201ENST00000263401 GOLGA6L6A8MZA4 724 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms