RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 RTEL1Q9NZ71 1219 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 SETDB1Q15047 1291 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 TSNARE1Q96NA8 513 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 SWAP70Q9UH65 585 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 ATP5DP30049 168 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 SREK1Q8WXA9 508 aaKnown RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 LZTS2Q9BRK4 669 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 ADCY9O60503 1353 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 HPDP32754 393 aaPredicted RBP16.46■□□□□ 0.23
PPM1F-201ENST00000263212 CFAP221Q4G0U5 840 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
PPM1F-201ENST00000263212 PLCB3Q01970 1234 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
PPM1F-201ENST00000263212 KCNK9Q9NPC2 374 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
PPM1F-201ENST00000263212 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
PPM1F-201ENST00000263212 CCDC50Q8IVM0 306 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 TXKP42681 527 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 TEX11Q8IYF3 940 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 CEP63Q96MT8 703 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
PPM1F-201ENST00000263212 NKIRAS1Q9NYS0 192 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
PPM1F-201ENST00000263212 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 SIRT2Q8IXJ6 389 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
PPM1F-201ENST00000263212 PDIA3P30101 505 aaKnown RBP16.44■□□□□ 0.22
PPM1F-201ENST00000263212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■■■■□ 21.4
PPM1F-201ENST00000263212 NDUFA8P51970 172 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 LONRF3Q496Y0 759 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPM1F-201ENST00000263212 FANCLQ9NW38 375 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 STX10O60499 249 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 MXRA7P84157 204 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 SMC6Q96SB8 1091 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 VPS54Q9P1Q0 977 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 UTP11Q9Y3A2 253 aaKnown RBP16.44■□□□□ 0.22
PPM1F-201ENST00000263212 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
PPM1F-201ENST00000263212 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 IFT74Q96LB3 600 aa16.44■□□□□ 0.22
PPM1F-201ENST00000263212 KCNQ3O43525 872 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 GJC1P36383 396 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 SCRN1Q12765 414 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 CEP128Q6ZU80 1094 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 VIMP08670 466 aaKnown RBP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 TCIRG1Q13488 830 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 STAMQ92783 540 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 IFIH1Q9BYX4 1025 aaKnown RBP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 HAUS4Q9H6D7 363 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 CABP7Q86V35 215 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 SNX29Q8TEQ0 813 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
PPM1F-201ENST00000263212 STK24Q9Y6E0 443 aa16.43■□□□□ 0.22
PPM1F-201ENST00000263212 SPATA1Q5VX52 437 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 ATP8B1O43520 1251 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
PPM1F-201ENST00000263212 ALDH3A1P30838 453 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 SPOPO43791 374 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
PPM1F-201ENST00000263212 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
PPM1F-201ENST00000263212 ATP7BP35670 1465 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 CEP104O60308 925 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 CLUL1Q15846 466 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 RABGGTAQ92696 567 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 MPHOSPH6Q99547 160 aaKnown RBP16.42■□□□□ 0.22
PPM1F-201ENST00000263212 CSRNP2Q9H175 543 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 RCOR1Q9UKL0 485 aa16.42■□□□□ 0.22
PPM1F-201ENST00000263212 KCNJ18B7U540 433 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 IKBKBO14920 756 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 FLOT1O75955 427 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 FGAP02671 866 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 DNM2P50570 870 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
PPM1F-201ENST00000263212 KCNJ12Q14500 433 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms