RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 SLC30A9Q6PML9 568 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 FUT8Q9BYC5 575 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 ARHGAP23Q9P227 1491 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 PNPLA6Q8IY17 1366 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 POLE2P56282 527 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 MXRA7P84157 204 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 USP4Q13107 963 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 GSPT1P15170 499 aaKnown RBP9.42□□□□□ -0.9
LDB3-201ENST00000263066 VPS72Q15906 364 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 B4GALNT2Q8NHY0 566 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 KAT2BQ92831 832 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 EDC3Q96F86 508 aaKnown RBP9.42□□□□□ -0.9
LDB3-201ENST00000263066 INCENPQ9NQS7 918 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 SLIT1O75093 1534 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 GOLGA6L9A6NEM1 432 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 UBASH3AP57075 661 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 PRKG1Q13976 671 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 HSP90AB4PQ58FF6 505 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 THEMIS2Q5TEJ8 643 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 TDRD7Q8NHU6 1098 aaKnown RBP9.42□□□□□ -0.9
LDB3-201ENST00000263066 SMARCC2Q8TAQ2 1214 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
LDB3-201ENST00000263066 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 SH3TC1Q8TE82 1336 aa9.42□□□□□ -0.9
LDB3-201ENST00000263066 PIK3C2AO00443 1686 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 IFIT1P09914 478 aaKnown RBP9.41□□□□□ -0.9
LDB3-201ENST00000263066 ITGA6P23229 1130 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 XPO4Q9C0E2 1151 aaKnown RBP9.41□□□□□ -0.9
LDB3-201ENST00000263066 MINDY4BA8MYZ0 360 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 PYGLP06737 847 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 ZKSCAN4Q969J2 545 aaPredicted RBP9.41□□□□□ -0.9
LDB3-201ENST00000263066 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 GOLGA6BA6NDN3 693 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 PFDN1O60925 122 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 CDKL5O76039 1030 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 CLTAP09496 248 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 OLFM4Q6UX06 510 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 PLA2G4DQ86XP0 818 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 RAB11FIP4Q86YS3 637 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 STAG1Q8WVM7 1258 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 DHX58Q96C10 678 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
LDB3-201ENST00000263066 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 CPA1P15085 419 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 PCK1P35558 622 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.9
LDB3-201ENST00000263066 HAND2P61296 217 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 PPP1R7Q15435 360 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 VPS53Q5VIR6 699 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 ARHGEF1Q92888 912 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 CLEC11AQ9Y240 323 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 RGPD2P0DJD1 1756 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 NR1I2O75469 434 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 ITPK1Q13572 414 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 DOK7Q18PE1 504 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 CCDC152Q4G0S7 254 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 IGSF22Q8N9C0 903 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 C3orf20Q8ND61 904 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 RIN2Q8WYP3 895 aaPredicted RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 SEC62Q99442 399 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
LDB3-201ENST00000263066 CYP46A1Q9Y6A2 500 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
LDB3-201ENST00000263066 CDC25CP30307 473 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 RPS6KA3P51812 740 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 TFCP2Q12800 502 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.91
LDB3-201ENST00000263066 TTC6Q86TZ1 520 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 PLBD2Q8NHP8 589 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 CDC5LQ99459 802 aaKnown RBP9.4□□□□□ -0.91
LDB3-201ENST00000263066 DESI2Q9BSY9 194 aa9.4□□□□□ -0.91
LDB3-201ENST00000263066 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.91
LDB3-201ENST00000263066 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 MCM3P25205 808 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 CAVIN4Q5BKX8 364 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 E4F1Q66K89 784 aaPredicted RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms