RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 GREM2Q9H772 168 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
SPG11-201ENST00000261866 KIF4AO95239 1232 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 KCNH3Q9ULD8 1083 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 NUP160Q12769 1436 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 FBF1Q8TES7 1133 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 ZHX1Q9UKY1 873 aaPredicted RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 LUC7L2Q9Y383 392 aaKnown RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 PUS3Q9BZE2 481 aaKnown RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 TRIM31Q9BZY9 425 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 PRR16Q569H4 304 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 TMEM87BQ96K49 555 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 ELP1O95163 1332 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 CD19P15391 556 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 PPEF1O14829 653 aaPredicted RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 HGSO14964 777 aaPredicted RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 COBLO75128 1261 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPG11-201ENST00000261866 HAUS3Q68CZ6 603 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 UBLCP1Q8WVY7 318 aaPredicted RBP13.59□□□□□ -0.23
SPG11-201ENST00000261866 KRT86O43790 486 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 TBC1D8BQ0IIM8 1120 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 CCDC6Q16204 474 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 SULF1Q8IWU6 871 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
SPG11-201ENST00000261866 PLCD1P51178 756 aa13.58□□□□□ -0.23
SPG11-201ENST00000261866 TPD52P55327 224 aaPredicted RBP13.58□□□□□ -0.23
SPG11-201ENST00000261866 KRT83P78385 493 aa13.58□□□□□ -0.23
SPG11-201ENST00000261866 PROSER3Q2NL68 480 aa13.58□□□□□ -0.23
SPG11-201ENST00000261866 E7EWF7 191 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 CHL1O00533 1208 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 RAD17O75943 681 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 GEN1Q17RS7 908 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 CCDC122Q5T0U0 273 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 CSGALNACT2Q8N6G5 542 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 PRPF6O94906 941 aaKnown RBP13.58□□□□□ -0.24
SPG11-201ENST00000261866 ADORA1P30542 326 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 SLC8A3P57103 927 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 NOLC1Q14978 699 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPG11-201ENST00000261866 TECP42680 631 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 SIK1P57059 783 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 CABP7Q86V35 215 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 SREK1Q8WXA9 508 aaKnown RBP13.58□□□□□ -0.24
SPG11-201ENST00000261866 GOLGA1Q92805 767 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 MED10Q9BTT4 135 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 SEC31BQ9NQW1 1179 aa13.58□□□□□ -0.24
SPG11-201ENST00000261866 EXOC3O60645 756 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 GDF11O95390 407 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 CYP2J2P51589 502 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
SPG11-201ENST00000261866 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 FLOT1O75955 427 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 TNNI1P19237 187 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 DNM2P50570 870 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 RAD50Q92878 1312 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 ASIC2Q16515 512 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 KIFAP3Q92845 792 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 TMEM94Q12767 1356 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 MIER3Q7Z3K6 550 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
SPG11-201ENST00000261866 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 PRPHP41219 470 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 CNNM4Q6P4Q7 775 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
SPG11-201ENST00000261866 UBN2Q6ZU65 1347 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 ERVV-2B6SEH9 535 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 KRT40Q6A162 431 aa13.57□□□□□ -0.24
SPG11-201ENST00000261866 PNOCQ13519 176 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 SPECC1LQ69YQ0 1117 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 NLRX1Q86UT6 975 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 SPATA24Q86W54 205 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
SPG11-201ENST00000261866 GAS7O60861 476 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms