RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 MYBL2P10244 700 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 ERVK-24P63145 666 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 SPATS2Q86XZ4 545 aaKnown RBP8.16□□□□□ -1.1
CSDE1-201ENST00000261443 AIFM3Q96NN9 605 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 MAP3K14Q99558 947 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 ALG1Q9BT22 464 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 AMOTL2Q9Y2J4 779 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
CSDE1-201ENST00000261443 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 PATL2C9JE40 543 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 PRC1O43663 620 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 SRGAP2O75044 1071 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 ERCC5P28715 1186 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 CKAP4Q07065 602 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 KLHL10Q6JEL2 608 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 MICALCLQ6ZW33 695 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 GRAMD1CQ8IYS0 662 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 KRI1Q8N9T8 703 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 CTAGE1Q96RT6 745 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 CENPHQ9H3R5 247 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 LGR6Q9HBX8 967 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 BCCIPQ9P287 314 aaKnown RBP eCLIP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 ADD3Q9UEY8 706 aaKnown RBP8.15□□□□□ -1.1
CSDE1-201ENST00000261443 SERTAD1Q9UHV2 236 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 UTYO14607 1347 aa8.15□□□□□ -1.1
CSDE1-201ENST00000261443 A6NNZ2 444 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 BTBD11A6QL63 1104 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 GOLIM4O00461 696 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 OPA1O60313 960 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 NEBLO76041 1014 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 IBSPP21815 317 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-201ENST00000261443 PBX1P40424 430 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.11
CSDE1-201ENST00000261443 STX17P56962 302 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 AIMP1Q12904 312 aaKnown RBP8.15□□□□□ -1.11
CSDE1-201ENST00000261443 TUBB8Q3ZCM7 444 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 NT5DC1Q5TFE4 455 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 SPATA1Q5VX52 437 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.11
CSDE1-201ENST00000261443 ELOA2Q8IYF1 753 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-201ENST00000261443 FBXL16Q8N461 479 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 TRIML1Q8N9V2 468 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 CAGE1Q8TC20 777 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 SH3GL2Q99962 352 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 KLC4Q9NSK0 619 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 TRIM10Q9UDY6 481 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 ZMYM6O95789 1325 aa8.15□□□□□ -1.11
CSDE1-201ENST00000261443 GCFC2P16383 781 aaKnown RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 CALRP27797 417 aaKnown RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 ATP2B2Q01814 1243 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 PDCLQ13371 301 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 RNF187Q5TA31 235 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 KRT40Q6A162 431 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 SND1Q7KZF4 910 aaKnown RBP eCLIP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 USHBP1Q8N6Y0 703 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 RUFY1Q96T51 708 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 NUP88Q99567 741 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 HINFPQ9BQA5 517 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 ABHD10Q9NUJ1 306 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 FAM184BQ9ULE4 1060 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 MRC1P22897 1456 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 PSMD14O00487 310 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 ZEB2O60315 1214 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 ATP1A1P05023 1023 aaKnown RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 FECHP22830 423 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 HAND2P61296 217 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 IQCA1Q86XH1 822 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 EGFL6Q8IUX8 553 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
CSDE1-201ENST00000261443 CDR1P51861 262 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 CEP85LQ5SZL2 805 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 TEX11Q8IYF3 940 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 PAG1Q9NWQ8 432 aa8.14□□□□□ -1.11
CSDE1-201ENST00000261443 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 TMCO5BA8MYB1 307 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 KDM6AO15550 1401 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-201ENST00000261443 PAX7P23759 505 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 CCT6AP40227 531 aaKnown RBP8.13□□□□□ -1.11
CSDE1-201ENST00000261443 SKOR1P84550 965 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 ACTN3Q08043 901 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-201ENST00000261443 TRIM29Q14134 588 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 CCDC40Q4G0X9 1142 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 HSP90AB3PQ58FF7 597 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 EPHA10Q5JZY3 1008 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
CSDE1-201ENST00000261443 TBC1D22AQ8WUA7 517 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 JAKMIP2Q96AA8 810 aa8.13□□□□□ -1.11
CSDE1-201ENST00000261443 FAXDC2Q96IV6 333 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms