RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CD44P16070 742 aaKnown RBP18.09■□□□□ 0.49
LMNB1-201ENST00000261366 DCCP43146 1447 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 FXR1P51114 621 aaKnown RBP eCLIP18.09■□□□□ 0.49
LMNB1-201ENST00000261366 NTRK3Q16288 839 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 TFR2Q9UP52 801 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 CTAGE9A4FU28 777 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 SLC20A2Q08357 652 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 MORC3Q14149 939 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 HSP90B2PQ58FF3 399 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 TRIM10Q9UDY6 481 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 FBXO2Q9UK22 296 aaPredicted RBP18.09■□□□□ 0.49
LMNB1-201ENST00000261366 ENC1O14682 589 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 ZMYND10O75800 440 aa18.09■□□□□ 0.49
LMNB1-201ENST00000261366 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.09■□□□□ 0.49
LMNB1-201ENST00000261366 ZNF532Q9HCE3 1301 aa18.08■□□□□ 0.49
LMNB1-201ENST00000261366 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 CASP8Q14790 479 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 VPS16Q9H269 839 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 RABEP2Q9H5N1 569 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 PIH1D3Q9NQM4 214 aaKnown RBP18.08■□□□□ 0.48
LMNB1-201ENST00000261366 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
LMNB1-201ENST00000261366 ERLIN1O75477 346 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 HELBQ8NG08 1087 aaPredicted RBP18.08■□□□□ 0.48
LMNB1-201ENST00000261366 WWC3Q9ULE0 1092 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.48
LMNB1-201ENST00000261366 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
LMNB1-201ENST00000261366 A0A087X0B3 334 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 CEP112Q8N8E3 955 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 IGDCC4Q8TDY8 1250 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 A0A1B0GTH6 734 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 CTAGE15A4D2H0 777 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 SNAP23O00161 211 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 CTAGE8P0CG41 777 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 GPTP24298 496 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 PLCD1P51178 756 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 CTAGE6Q86UF2 777 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 CTAGE4Q8IX94 777 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.07■□□□□ 0.488e-7■■■□□ 17.2
LMNB1-201ENST00000261366 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 AKAP2Q9Y2D5 859 aa18.07■□□□□ 0.48
LMNB1-201ENST00000261366 LRRIQ3A6PVS8 624 aaPredicted RBP18.06■□□□□ 0.48
LMNB1-201ENST00000261366 RNF225M0QZC1 329 aaPredicted RBP18.06■□□□□ 0.48
LMNB1-201ENST00000261366 EIF3JO75822 258 aaKnown RBP18.06■□□□□ 0.48
LMNB1-201ENST00000261366 RIN2Q8WYP3 895 aaPredicted RBP18.06■□□□□ 0.48
LMNB1-201ENST00000261366 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 NUP88Q99567 741 aaPredicted RBP18.06■□□□□ 0.48
LMNB1-201ENST00000261366 BLZF1Q9H2G9 400 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 HDAC6Q9UBN7 1215 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 GUCA1BQ9UMX6 200 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 PTPREP23469 700 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
LMNB1-201ENST00000261366 FAM237AA0A1B0GTK4 181 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 ACTN4O43707 911 aaKnown RBP18.05■□□□□ 0.48
LMNB1-201ENST00000261366 MMP1P03956 469 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 FAM204AQ9H8W3 233 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 CTNND2Q9UQB3 1225 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 MFAP3LO75121 409 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 GYPCP04921 128 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 ADD2P35612 726 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 IFIT5Q13325 482 aaKnown RBP18.05■□□□□ 0.48
LMNB1-201ENST00000261366 GSPT2Q8IYD1 628 aaKnown RBP18.05■□□□□ 0.48
LMNB1-201ENST00000261366 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 SRGAP2O75044 1071 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 PRDM1O75626 825 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 PANX2Q96RD6 677 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 CNNM1Q9NRU3 951 aa18.05■□□□□ 0.48
LMNB1-201ENST00000261366 N4BP3O15049 544 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 PRKAB2O43741 272 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 SARSP49591 514 aaKnown RBP18.04■□□□□ 0.48
LMNB1-201ENST00000261366 TRIM22Q8IYM9 498 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 NAPGQ99747 312 aaPredicted RBP18.04■□□□□ 0.48
LMNB1-201ENST00000261366 NAPBQ9H115 298 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 TAB2Q9NYJ8 693 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 TACC3Q9Y6A5 838 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 MYO1BO43795 1136 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 CIAO1O76071 339 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 ERVK-24P63145 666 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 APTXQ7Z2E3 356 aaKnown RBP18.04■□□□□ 0.48
LMNB1-201ENST00000261366 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 ATG3Q9NT62 314 aa18.04■□□□□ 0.48
LMNB1-201ENST00000261366 DPYDQ12882 1025 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
LMNB1-201ENST00000261366 EEF2KMTQ96G04 330 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
LMNB1-201ENST00000261366 PHKA1P46020 1223 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 RTN1Q16799 776 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 FILIP1LQ4L180 1135 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 VPS54Q9P1Q0 977 aa18.03■□□□□ 0.48
LMNB1-201ENST00000261366 FMNL1O95466 1100 aaPredicted RBP18.02■□□□□ 0.48
LMNB1-201ENST00000261366 PDE6AP16499 860 aa18.02■□□□□ 0.48
LMNB1-201ENST00000261366 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms