RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IL13P35225 146 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 C8orf74Q6P047 294 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 CALCRLQ16602 461 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 LIN9Q5TKA1 542 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
COL8A1-201ENST00000261037 TRIM6Q9C030 488 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-201ENST00000261037 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 CFBP00751 764 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 LRMPQ12912 555 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 KLHL7Q8IXQ5 586 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 LRWD1Q9UFC0 647 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 DAAM2Q86T65 1068 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NKIRAS1Q9NYS0 192 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 MYO1AQ9UBC5 1043 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 SLC1A4P43007 532 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 CCT6BQ92526 530 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 EXOC7Q9UPT5 735 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 CUTAO60888 179 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NLRP12P59046 1061 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 PNOCQ13519 176 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NSMFQ6X4W1 530 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 MYO5CQ9NQX4 1742 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 SLC8A3P57103 927 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 GABPAQ06546 454 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 NONOQ15233 471 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 VWA3BQ502W6 1294 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 CABP7Q86V35 215 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 SECISBP2LQ93073 1101 aaKnown RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 PFDN4Q9NQP4 134 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-201ENST00000261037 CTTNBP2NLQ9P2B4 639 aa13.48□□□□□ -0.25
COL8A1-201ENST00000261037 ZNF202O95125 648 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 ALDH3A1P30838 453 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 HSPA1LP34931 641 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 HERC4Q5GLZ8 1057 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 KRT40Q6A162 431 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 H0YIN7 160 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 CETN3O15182 167 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 ZBED4O75132 1171 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 TRIM14Q14142 442 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 LPIN2Q92539 896 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 EDC3Q96F86 508 aaKnown RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
COL8A1-201ENST00000261037 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-201ENST00000261037 ZWINTO95229 277 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 POSTNQ15063 836 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 UBL4BQ8N7F7 174 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 ZNF75DP51815 510 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 ARHGAP44Q17R89 818 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 AFAP1L1Q8TED9 768 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 NOX5Q96PH1 765 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 CARD6Q9BX69 1037 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 ZMYND15Q9H091 742 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 MTX1Q13505 466 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 ZNF365Q70YC5 407 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 DNM3Q9UQ16 869 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
COL8A1-201ENST00000261037 CEP104O60308 925 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.26
COL8A1-201ENST00000261037 KRBA2Q6ZNG9 492 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.26
COL8A1-201ENST00000261037 CIB2O75838 187 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 CEP85LQ5SZL2 805 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 C10orf67Q8IYJ2 551 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.26
COL8A1-201ENST00000261037 MAST3O60307 1309 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 EXOC3O60645 756 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
COL8A1-201ENST00000261037 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 IVNS1ABPQ9Y6Y0 642 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL8A1-201ENST00000261037 SGSM2O43147 1006 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
COL8A1-201ENST00000261037 TFAP4Q01664 338 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 ITIH3Q06033 890 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 CLUL1Q15846 466 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms