RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ST5P78524 1137 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 USP21Q9UK80 565 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 NID2Q14112 1375 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 A0A1B0GVL5 298 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 SEC31AO94979 1220 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 PCP11498 1178 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 CASQ1P31415 396 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 TDO2P48775 406 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 STK38Q15208 465 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 WASF1Q92558 559 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 STK36Q9NRP7 1315 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
CHRNA1-201ENST00000261007 GSG1L2A8MUP6 293 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ZBTB43O43298 467 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 CMA1P23946 247 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 TUBB4BP68371 445 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 BRD3Q15059 726 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 APOA5Q6Q788 366 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 VPS37DQ86XT2 251 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 FUT8Q9BYC5 575 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 LY75O60449 1722 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ERICH2A1L162 156 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 CCDC151A5D8V7 595 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 B4E1Z4 1266 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 SPTLC2O15270 562 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ZNF202O95125 648 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 NT5C2P49902 561 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 UBASH3AP57075 661 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 TMEM67Q5HYA8 995 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 NFXL1Q6ZNB6 911 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 IGDCC4Q8TDY8 1250 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 ANAPC4Q9UJX5 808 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 CCNL1Q9UK58 526 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
CHRNA1-201ENST00000261007 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 MYO1CO00159 1063 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 MAP2K7O14733 419 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 FANCGO15287 622 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 IVLP07476 585 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 CYP7A1P22680 504 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 MYL5Q02045 173 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 FBXW7Q969H0 707 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 LY9Q9HBG7 655 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 SLC12A7Q9Y666 1083 aa12.33□□□□□ -0.44
CHRNA1-201ENST00000261007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 GNPATO15228 680 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 LMOD1P29536 600 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 ACTN2P35609 894 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TNNT3P45378 269 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TRIM29Q14134 588 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 LCORLQ8N3X6 602 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 PARD6BQ9BYG5 372 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 ADAM21Q9UKJ8 722 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 STX10O60499 249 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 SERPINC1P01008 464 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TXLNAP40222 546 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 SRLQ86TD4 932 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 ZCCHC17Q9NP64 241 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
CHRNA1-201ENST00000261007 SNAP23O00161 211 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 TUBB2AQ13885 445 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms