RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 AKR1B1P15121 316 aa18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 PRKG1Q13976 671 aa18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 SHROOM1Q2M3G4 852 aaPredicted RBP18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 CHST3Q7LGC8 479 aa18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 ZNF341Q9BYN7 854 aa18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 ZSWIM5Q9P217 1185 aa18.67■□□□□ 0.58
CCDC90B-201ENST00000260054 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 USP2O75604 605 aaPredicted RBP18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 GDF11O95390 407 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 NF2P35240 595 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 ANTXR2P58335 489 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 JAG1P78504 1218 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 TFAP4Q01664 338 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 BLOC1S2Q6QNY1 142 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 TCEANC2Q96MN5 208 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 MYH8P13535 1937 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 HMGB1P09429 215 aaKnown RBP18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 DHX32Q7L7V1 743 aaKnown RBP18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 KLRG1Q96E93 195 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 CCDC17Q96LX7 622 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 ZNF112Q9UJU3 913 aa18.66■□□□□ 0.58
CCDC90B-201ENST00000260054 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 RPS6KB1P23443 525 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 INPP5BP32019 993 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 CYP46A1Q9Y6A2 500 aa18.65■□□□□ 0.58
CCDC90B-201ENST00000260054 PRC1O43663 620 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 PPP1R12BO60237 982 aaPredicted RBP18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 NMT2O60551 498 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 TOMM70O94826 608 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 MCM5P33992 734 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 CAP2P40123 477 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 NT5C2P49902 561 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 MOB2Q70IA6 237 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 NEDD1Q8NHV4 660 aa18.64■□□□□ 0.57
CCDC90B-201ENST00000260054 MPHOSPH10O00566 681 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 RABEP1Q15276 862 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 RBM46Q8TBY0 533 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 PLIN4Q96Q06 1357 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 LRRC2Q9BYS8 371 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 IL17RBQ9NRM6 502 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 GH2P01242 217 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 GUCY1A2P33402 732 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 NEK4P51957 841 aa18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-201ENST00000260054 GREB1LQ9C091 1923 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 PASKQ96RG2 1323 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 IGKV6D-41A0A0C4DH26 115 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 CTNND1O60716 968 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 TTLL12Q14166 644 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 MAP3K11Q16584 847 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 GPHNQ9NQX3 736 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 TCP11L1Q9NUJ3 509 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 ZBTB21Q9ULJ3 1066 aa18.62■□□□□ 0.57
CCDC90B-201ENST00000260054 PAPPA2Q9BXP8 1791 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 TNKSO95271 1327 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 IREB2P48200 963 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 SEPT2Q15019 361 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 CST9Q5W186 159 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 IQCA1Q86XH1 822 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 IGDCC4Q8TDY8 1250 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 CEP95Q96GE4 821 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 TTC14Q96N46 770 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 ZSCAN10Q96SZ4 725 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 CABP5Q9NP86 173 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
CCDC90B-201ENST00000260054 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 Q6ZUG5 572 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 SCYL3Q8IZE3 742 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 GBA2Q9HCG7 927 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 OTOFQ9HC10 1997 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 SH2B2O14492 632 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 ASNSP08243 561 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 MAP3K9P80192 1104 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 SEC23AQ15436 765 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 NOL9Q5SY16 702 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 ARMC9Q7Z3E5 817 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 CCDC84Q86UT8 332 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 TMEM87BQ96K49 555 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms