RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 KIAA1468Q9P260 1216 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 A0A1W2PQD8 194 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 GOLGA6L19H0YKK7 550 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 UFL1O94874 794 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 PKN1Q16512 942 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 HSP90AA4PQ58FG1 418 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 GRAMD1CQ8IYS0 662 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
THSD1-201ENST00000258613 BRIP1Q9BX63 1249 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
THSD1-201ENST00000258613 TROAPQ12815 778 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 MAPKAPK5Q8IW41 473 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 CRNKL1Q9BZJ0 848 aaKnown RBP15.14■□□□□ 0.01
THSD1-201ENST00000258613 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 SPATA31A6Q5VVP1 1343 aa15.14■□□□□ 0.01
THSD1-201ENST00000258613 USP17L3A6NCW0 530 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 USP17L4A6NCW7 530 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 SYKP43405 635 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 DDR1Q08345 913 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
THSD1-201ENST00000258613 USP17L1Q7RTZ2 530 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 PROM2Q8N271 834 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 TSC1Q92574 1164 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 CPVLQ9H3G5 476 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 LDHBP07195 334 aaKnown RBP15.13■□□□□ 0.01
THSD1-201ENST00000258613 CMA1P23946 247 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 PLCD1P51178 756 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
THSD1-201ENST00000258613 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
THSD1-201ENST00000258613 TSPY2A6NKD2 308 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 USP5P45974 858 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 FUT2Q10981 343 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
THSD1-201ENST00000258613 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 CTAGE5O15320 804 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 DEXIO95424 95 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 PAXIP1Q6ZW49 1069 aaPredicted RBP15.12■□□□□ 0.01
THSD1-201ENST00000258613 FILIP1Q7Z7B0 1213 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 CATIPQ7Z7H3 387 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 TIAM2Q8IVF5 1701 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
THSD1-201ENST00000258613 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 POLLQ9UGP5 575 aa15.12■□□□□ 0.01
THSD1-201ENST00000258613 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 TFAP4Q01664 338 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 SAFBQ15424 915 aaKnown RBP eCLIP15.11■□□□□ 0.01
THSD1-201ENST00000258613 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
THSD1-201ENST00000258613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
THSD1-201ENST00000258613 SLURP2P0DP57 97 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 CASP1P29466 404 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
THSD1-201ENST00000258613 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 STAG2Q8N3U4 1231 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
THSD1-201ENST00000258613 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
THSD1-201ENST00000258613 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 ZNF827Q17R98 1081 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
THSD1-201ENST00000258613 SEMA3EO15041 775 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 LMOD1P29536 600 aaPredicted RBP15.1■□□□□ 0.01
THSD1-201ENST00000258613 METTL16Q86W50 562 aaKnown RBP15.1■□□□□ 0.01
THSD1-201ENST00000258613 CEP57L1Q8IYX8 460 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 GPKOWQ92917 476 aaPredicted RBP eCLIP15.1■□□□□ 0.01
THSD1-201ENST00000258613 KCNH3Q9ULD8 1083 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 XDHP47989 1333 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 COL24A1Q17RW2 1714 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
THSD1-201ENST00000258613 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 GOLGA8HP0CJ92 632 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 ATP1A3P13637 1013 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 ZRSR1Q15695 479 aaKnown RBP15.09■□□□□ 0.01
THSD1-201ENST00000258613 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 ZNF174Q15697 407 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 HPSEQ9Y251 543 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
THSD1-201ENST00000258613 RESP18Q5W5W9 173 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 MSL1Q68DK7 614 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 KIAA1524Q8TCG1 905 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 EPSTI1Q96J88 318 aa15.09■□□□□ 0.01
THSD1-201ENST00000258613 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0.01
THSD1-201ENST00000258613 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
THSD1-201ENST00000258613 LY75O60449 1722 aa15.08■□□□□ 0
THSD1-201ENST00000258613 WASF1Q92558 559 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms