RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 FAF1Q9UNN5 650 aaPredicted RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 RNF113AO15541 343 aaKnown RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 OTUD7AQ8TE49 926 aaPredicted RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 KRT9P35527 623 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 PSMC4P43686 418 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 TRAPPC3LQ5T215 181 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 GSTA5Q7RTV2 222 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 CXorf56Q9H5V9 222 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 PZPP20742 1482 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 IQSEC3Q9UPP2 1182 aaPredicted RBP12.2□□□□□ -0.46
DCLK1-201ENST00000255448 NFE2L3Q9Y4A8 694 aa12.2□□□□□ -0.46
DCLK1-201ENST00000255448 NMIQ13287 307 aaPredicted RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 RAB3IPQ96QF0 476 aaPredicted RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 RPGRIP1Q96KN7 1286 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 CHUKO15111 745 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 MGARPQ8TDB4 240 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 B4DLN1 442 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 TPD52P55327 224 aaPredicted RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 PHLDB3Q6NSJ2 640 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 CDC37L1Q7L3B6 337 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 ARHGAP24Q8N264 748 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 PARD6BQ9BYG5 372 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 UTP11Q9Y3A2 253 aaKnown RBP12.19□□□□□ -0.46
DCLK1-201ENST00000255448 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
DCLK1-201ENST00000255448 CALML3P27482 149 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 ASIC1P78348 528 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 TRIM14Q14142 442 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
DCLK1-201ENST00000255448 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 PA2G4Q9UQ80 394 aaKnown RBP12.18□□□□□ -0.46
DCLK1-201ENST00000255448 CCDC62Q6P9F0 684 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 PLBD2Q8NHP8 589 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 STK32BQ9NY57 414 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 CTNNA1P35221 906 aaKnown RBP12.18□□□□□ -0.46
DCLK1-201ENST00000255448 RANBP1P43487 201 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 SRGAP1Q7Z6B7 1085 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
DCLK1-201ENST00000255448 RASSF2P50749 326 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 USP37Q86T82 979 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 SYCP3Q8IZU3 236 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
DCLK1-201ENST00000255448 ZNF202O95125 648 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 TBC1D8BQ0IIM8 1120 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
DCLK1-201ENST00000255448 TRIM75PA6NK02 468 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 TRIM66O15016 1216 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 GNPATO15228 680 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 NR1I2O75469 434 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 TEX11Q8IYF3 940 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 PBRM1Q86U86 1689 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 ZFYVE16Q7Z3T8 1539 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 TAF11Q15544 211 aa12.17□□□□□ -0.46
DCLK1-201ENST00000255448 MRRFQ96E11 262 aaKnown RBP12.17□□□□□ -0.46
DCLK1-201ENST00000255448 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms