RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DAPK3O43293 454 aa20.85■□□□□ 0.93
SMARCC1-201ENST00000254480 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
SMARCC1-201ENST00000254480 STMN4Q9H169 189 aaPredicted RBP20.85■□□□□ 0.93
SMARCC1-201ENST00000254480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 CABP7Q86V35 215 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 KLHL7Q8IXQ5 586 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 DDX23Q9BUQ8 820 aaKnown RBP20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 PPANQ9NQ55 473 aaKnown RBP20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 TSGA10Q9BZW7 698 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 TTLL3Q9Y4R7 772 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 PAGR1Q9BTK6 254 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 MTX1Q13505 466 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 CFAP157Q5JU67 520 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 NELFBQ8WX92 580 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 NFE2L3Q9Y4A8 694 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 EXOC3O60645 756 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 MAP7D1Q3KQU3 841 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 MFSD14BQ5SR56 506 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 DNM3Q9UQ16 869 aa20.84■□□□□ 0.93
SMARCC1-201ENST00000254480 PTH1RQ03431 593 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 TIGD1Q96MW7 591 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 CUTAO60888 179 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 NAP1L4Q99733 375 aaKnown RBP20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 NLRC4Q9NPP4 1024 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 EDC4Q6P2E9 1401 aaKnown RBP20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 VIMP08670 466 aaKnown RBP20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 ATP2A2P16615 1042 aaKnown RBP20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 PPARAQ07869 468 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 POSTNQ15063 836 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 ME3Q16798 604 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 CARD6Q9BX69 1037 aa20.83■□□□□ 0.93
SMARCC1-201ENST00000254480 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.92
SMARCC1-201ENST00000254480 LRRC47Q8N1G4 583 aaKnown RBP20.83■□□□□ 0.92
SMARCC1-201ENST00000254480 CD19P15391 556 aa20.83■□□□□ 0.92
SMARCC1-201ENST00000254480 LRRC24Q50LG9 513 aa20.83■□□□□ 0.92
SMARCC1-201ENST00000254480 FAM207AQ9NSI2 230 aaPredicted RBP20.83■□□□□ 0.92
SMARCC1-201ENST00000254480 A0A0D9SFI3 127 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 FAM204AQ9H8W3 233 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 SH3BP5O60239 455 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 ZBED4O75132 1171 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 DLGAP5Q15398 846 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 CYP26C1Q6V0L0 522 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 CTTNBP2NLQ9P2B4 639 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 ODF2LQ9ULJ1 636 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 CTSWP56202 376 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 NAPGQ99747 312 aaPredicted RBP20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 SLF1Q9BQI6 1058 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 SERTAD1Q9UHV2 236 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 FAM182BQ5T319 152 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 HAUS7Q99871 368 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 MROH5Q6ZUA9 1318 aa20.82■□□□□ 0.92
SMARCC1-201ENST00000254480 KCNQ4P56696 695 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 C8orf74Q6P047 294 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 CHAMP1Q96JM3 812 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 SMCO2A6NFE2 343 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 LLPHQ9BRT6 129 aaKnown RBP20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 GDAP1L1Q96MZ0 367 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 AZI2Q9H6S1 392 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 PCDHB13Q9Y5F0 798 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 COL17A1Q9UMD9 1497 aaPredicted RBP20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 SMC1BQ8NDV3 1235 aa20.81■□□□□ 0.92
SMARCC1-201ENST00000254480 TESPA1A2RU30 521 aaPredicted RBP20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 CEP104O60308 925 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 NIM1KQ8IY84 436 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.923e-6■□□□□ 9.3
SMARCC1-201ENST00000254480 TRIM7Q9C029 511 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 TTC14Q96N46 770 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 SNX16P57768 344 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 CCDC26Q8TAB7 109 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 COBLO75128 1261 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 NLRP12P59046 1061 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 ANO3Q9BYT9 981 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 ADKP55263 362 aaKnown RBP20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 FAM76AQ8TAV0 307 aa20.8■□□□□ 0.92
SMARCC1-201ENST00000254480 TECP42680 631 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 ZNF75DP51815 510 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 TYW1BQ6NUM6 668 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 KRT25Q7Z3Z0 450 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 CCDC117Q8IWD4 279 aaPredicted RBP20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 SLC8A3P57103 927 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 KSR1Q8IVT5 923 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 IL17REQ8NFR9 667 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 MAST3O60307 1309 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 METTL13Q8N6R0 699 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 EEF2KMTQ96G04 330 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 CYP2J2P51589 502 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 TCIRG1Q13488 830 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 RNF169Q8NCN4 708 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 EBAG9O00559 213 aa20.79■□□□□ 0.92
SMARCC1-201ENST00000254480 DCUN1D2Q6PH85 259 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms