RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
APOBEC3A-201ENST00000249116 ASCC2Q9H1I8 757 aaPredicted RBP15.75■□□□□ 0.11
APOBEC3A-201ENST00000249116 TLR7Q9NYK1 1049 aaKnown RBP15.75■□□□□ 0.11
APOBEC3A-201ENST00000249116 PALD1Q9ULE6 856 aa15.75■□□□□ 0.11
APOBEC3A-201ENST00000249116 C19orf81C9J6K1 198 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 H0YGN5 161 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 SGPL1O95470 568 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 BACE1P56817 501 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 IRX3P78415 501 aaPredicted RBP15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 MTMR2Q13614 643 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 CEP85Q6P2H3 762 aa15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 TMED8Q6PL24 325 aaPredicted RBP15.74■□□□□ 0.11
APOBEC3A-201ENST00000249116 LOC285556D6RIA3 1793 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 FARP2O94887 1054 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 MS4A1P11836 297 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 USP5P45974 858 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 DYNLL1P63167 89 aaKnown RBP15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 SAP30BPQ9UHR5 308 aaKnown RBP15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 ATAD5Q96QE3 1844 aa15.73■□□□□ 0.11
APOBEC3A-201ENST00000249116 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 GDF11O95390 407 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 UBE2Q1Q7Z7E8 422 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 AACSQ86V21 672 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 MAGEB6Q8N7X4 407 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 MORF4L1Q9UBU8 362 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 EXOC6BQ9Y2D4 811 aa15.72■□□□□ 0.11
APOBEC3A-201ENST00000249116 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
APOBEC3A-201ENST00000249116 MIGA1Q8NAN2 632 aa15.71■□□□□ 0.11
APOBEC3A-201ENST00000249116 ZBTB21Q9ULJ3 1066 aa15.71■□□□□ 0.11
APOBEC3A-201ENST00000249116 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.11
APOBEC3A-201ENST00000249116 HMGCRP04035 888 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 JAG1P78504 1218 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 PANK1Q8TE04 598 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 CENPFP49454 3210 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
APOBEC3A-201ENST00000249116 FXR1P51114 621 aaKnown RBP eCLIP15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 HERVK_113P62684 666 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 TTF1Q15361 905 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 TTC6Q86TZ1 520 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 GPRC5AQ8NFJ5 357 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 GTF3C2Q8WUA4 911 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 ANTXR1Q9H6X2 564 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
APOBEC3A-201ENST00000249116 CCAR1Q8IX12 1150 aaKnown RBP15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 RHPN1Q8TCX5 695 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 EHD4Q9H223 541 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 SERPINB13Q9UIV8 391 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 GJD2Q9UKL4 321 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 FOCADQ5VW36 1801 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 HMMRO75330 724 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 GH2P01242 217 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 SHROOM1Q2M3G4 852 aaPredicted RBP15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 TATDN1Q6P1N9 297 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 CLASRPQ8N2M8 674 aaKnown RBP15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 FEZ1Q99689 392 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 NUDT12Q9BQG2 462 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 IL1RAPL2Q9NP60 686 aa15.68■□□□□ 0.1
APOBEC3A-201ENST00000249116 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 MAPK4P31152 587 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 USP14P54578 494 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 PDE3AQ14432 1141 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 CERKLQ49MI3 558 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 SOCS4Q8WXH5 440 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 CDK5RAP2Q96SN8 1893 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 HMX1Q9NP08 348 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
APOBEC3A-201ENST00000249116 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 EVI5O60447 810 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 IFIT2P09913 472 aaKnown RBP15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 ABCB5Q2M3G0 1257 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 TRMT44Q8IYL2 757 aaKnown RBP15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 ANKLE1Q8NAG6 615 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 C12orf42Q96LP6 360 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 TXNRD2Q9NNW7 524 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 MKI67P46013 3256 aaKnown RBP15.66■□□□□ 0.1
APOBEC3A-201ENST00000249116 MYO5AQ9Y4I1 1855 aaKnown RBP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 POLR3DP05423 398 aaPredicted RBP15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 CYP2B6P20813 491 aa15.65■□□□□ 0.1
APOBEC3A-201ENST00000249116 ERVK-9P63128 1117 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms