RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 VAMP4O75379 141 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 DNAJB2P25686 324 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 CAP2P40123 477 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 MAP2K5Q13163 448 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 SLC39A5Q6ZMH5 540 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 DZIP1Q86YF9 867 aaKnown RBP14.94□□□□□ -0.02
RFPL3-201ENST00000249007 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 PDLIM7Q9NR12 457 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 TMOD4Q9NZQ9 345 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 UTYO14607 1347 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 SYNGAP1Q96PV0 1343 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 Q3C1V9 767 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
RFPL3-201ENST00000249007 EDC3Q96F86 508 aaKnown RBP14.93□□□□□ -0.02
RFPL3-201ENST00000249007 PAGR1Q9BTK6 254 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 ZNF576Q9H609 170 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 FLRT1Q9NZU1 646 aa14.93□□□□□ -0.02
RFPL3-201ENST00000249007 IL16Q14005 1332 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 TRIM43BA6NCK2 446 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 KBTBD13C9JR72 458 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 BTDP43251 543 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 BACE1P56817 501 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 MRPS5P82675 430 aaKnown RBP14.92□□□□□ -0.02
RFPL3-201ENST00000249007 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 SH3RF1Q7Z6J0 888 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 SLF2Q8IX21 1173 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 ZGPATQ8N5A5 531 aaKnown RBP14.92□□□□□ -0.02
RFPL3-201ENST00000249007 ARRDC4Q8NCT1 418 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 TRIM43Q96BQ3 446 aaPredicted RBP14.92□□□□□ -0.02
RFPL3-201ENST00000249007 DENND2AQ9ULE3 1009 aa14.92□□□□□ -0.02
RFPL3-201ENST00000249007 CHD7Q9P2D1 2997 aa14.91□□□□□ -0.02
RFPL3-201ENST00000249007 SNX17Q15036 470 aa14.91□□□□□ -0.02
RFPL3-201ENST00000249007 GTF3C2Q8WUA4 911 aaPredicted RBP14.91□□□□□ -0.02
RFPL3-201ENST00000249007 GAS2L1Q99501 681 aaPredicted RBP14.91□□□□□ -0.02
RFPL3-201ENST00000249007 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
RFPL3-201ENST00000249007 ARIH1Q9Y4X5 557 aaPredicted RBP14.91□□□□□ -0.02
RFPL3-201ENST00000249007 SEMA3EO15041 775 aa14.9□□□□□ -0.02
RFPL3-201ENST00000249007 GLRX3O76003 335 aaKnown RBP14.9□□□□□ -0.02
RFPL3-201ENST00000249007 ATP2B2Q01814 1243 aa14.9□□□□□ -0.02
RFPL3-201ENST00000249007 RRP1BQ14684 758 aaKnown RBP14.9□□□□□ -0.02
RFPL3-201ENST00000249007 TIFAQ96CG3 184 aa14.9□□□□□ -0.02
RFPL3-201ENST00000249007 FAM163AQ96GL9 167 aaPredicted RBP14.9□□□□□ -0.02
RFPL3-201ENST00000249007 HCN4Q9Y3Q4 1203 aa14.9□□□□□ -0.02
RFPL3-201ENST00000249007 NDUFB9Q9Y6M9 179 aa14.9□□□□□ -0.02
RFPL3-201ENST00000249007 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.89□□□□□ -0.03
RFPL3-201ENST00000249007 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.89□□□□□ -0.03
RFPL3-201ENST00000249007 EYA2O00167 538 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
RFPL3-201ENST00000249007 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
RFPL3-201ENST00000249007 CYP2C19P33261 490 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 EPHB4P54760 987 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 REV3LO60673 3130 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 MROH7-TTC4A0A0A0MT08 1334 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 ITGB8P26012 769 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 PHKA1P46020 1223 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 RHBDL3P58872 404 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 CCNA1P78396 465 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 ATP2B3Q16720 1220 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 TRPV1Q8NER1 839 aa14.89□□□□□ -0.03
RFPL3-201ENST00000249007 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 ASNSP08243 561 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 HOXC6P09630 235 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 CYBAP13498 195 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 TLE2Q04725 743 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
RFPL3-201ENST00000249007 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
RFPL3-201ENST00000249007 C1orf53Q5VUE5 145 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 HERC5Q9UII4 1024 aaKnown RBP14.88□□□□□ -0.03
RFPL3-201ENST00000249007 TACC3Q9Y6A5 838 aa14.88□□□□□ -0.03
RFPL3-201ENST00000249007 GPR75-ASB3A0A0A6YYF3 556 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 USP17L10C9JJH3 530 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 ADCYAP1R1P41586 468 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 FERMT2Q96AC1 680 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 NECAB3Q96P71 396 aaPredicted RBP14.87□□□□□ -0.03
RFPL3-201ENST00000249007 PRDM12Q9H4Q4 367 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 RABGAP1Q9Y3P9 1069 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 IVNS1ABPQ9Y6Y0 642 aa14.87□□□□□ -0.03
RFPL3-201ENST00000249007 TCF20Q9UGU0 1960 aaKnown RBP14.86□□□□□ -0.03
RFPL3-201ENST00000249007 CLTBP09497 229 aa14.86□□□□□ -0.03
RFPL3-201ENST00000249007 RAG1P15918 1043 aa14.86□□□□□ -0.03
RFPL3-201ENST00000249007 PTPREP23469 700 aa14.86□□□□□ -0.03
RFPL3-201ENST00000249007 FPGSQ05932 587 aa14.86□□□□□ -0.03
RFPL3-201ENST00000249007 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
RFPL3-201ENST00000249007 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
RFPL3-201ENST00000249007 SPTY2D1Q68D10 685 aaPredicted RBP14.86□□□□□ -0.03
RFPL3-201ENST00000249007 ATG9AQ7Z3C6 839 aa14.86□□□□□ -0.03
RFPL3-201ENST00000249007 RASGRF1Q13972 1273 aa14.85□□□□□ -0.03
RFPL3-201ENST00000249007 GRB14Q14449 540 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms