RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ARPP21Q9UBL0 812 aaPredicted RBP15.36■□□□□ 0.05
VPREB3-201ENST00000248948 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 ROBO3Q96MS0 1386 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 GNAT2P19087 354 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 SLC4A8Q2Y0W8 1093 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 PROCA1Q8NCQ7 364 aaPredicted RBP15.35■□□□□ 0.05
VPREB3-201ENST00000248948 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 R3HDMLQ9H3Y0 253 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
VPREB3-201ENST00000248948 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
VPREB3-201ENST00000248948 RBBP6Q7Z6E9 1792 aaKnown RBP15.34■□□□□ 0.05
VPREB3-201ENST00000248948 PDHXO00330 501 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 GPAA1O43292 621 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 PRKAB2O43741 272 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 TLR2O60603 784 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 GDF11O95390 407 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 SHMT1P34896 483 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 PLCD1P51178 756 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
VPREB3-201ENST00000248948 DGKZQ13574 1117 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
VPREB3-201ENST00000248948 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 OSBP2Q969R2 916 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
VPREB3-201ENST00000248948 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
VPREB3-201ENST00000248948 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
VPREB3-201ENST00000248948 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
VPREB3-201ENST00000248948 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.04
VPREB3-201ENST00000248948 CCDC84Q86UT8 332 aaPredicted RBP15.33■□□□□ 0.04
VPREB3-201ENST00000248948 MCOLN1Q9GZU1 580 aa15.33■□□□□ 0.04
VPREB3-201ENST00000248948 A0A0G2JMZ2 1700 aa15.33■□□□□ 0.04
VPREB3-201ENST00000248948 HTTP42858 3142 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 M0R2C6 588 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 GH2P01242 217 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 SP3Q02447 781 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 SPP2Q13103 211 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 CERKLQ49MI3 558 aaPredicted RBP15.32■□□□□ 0.04
VPREB3-201ENST00000248948 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 GADL1Q6ZQY3 521 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 ABHD8Q96I13 439 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 PNMA3Q9UL41 463 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
VPREB3-201ENST00000248948 C19orf81C9J6K1 198 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 CYP2D6P10635 497 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 BACE1P56817 501 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 JAG1P78504 1218 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPREB3-201ENST00000248948 MTMR2Q13614 643 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 SBK1Q52WX2 424 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 PLEKHM2Q8IWE5 1019 aa15.31■□□□□ 0.04
VPREB3-201ENST00000248948 GSG1L2A8MUP6 293 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 USP17L12C9JPN9 530 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 USP17L21D6R901 530 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 HMGCS2P54868 508 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 EVX2Q03828 476 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 ARHGEF6Q15052 776 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 SHROOM1Q2M3G4 852 aaPredicted RBP15.3■□□□□ 0.04
VPREB3-201ENST00000248948 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
VPREB3-201ENST00000248948 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
VPREB3-201ENST00000248948 USP17L10C9JJH3 530 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 TDO2P48775 406 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 CTR9Q6PD62 1173 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 C17orf99Q6UX52 265 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 SLC44A5Q8NCS7 719 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 NACAP1Q9BZK3 213 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
VPREB3-201ENST00000248948 GNRH1P01148 92 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 LACTBP83111 547 aaPredicted RBP15.28■□□□□ 0.04
VPREB3-201ENST00000248948 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 TREML2Q5T2D2 321 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 FBXO46Q6PJ61 603 aaPredicted RBP15.28■□□□□ 0.04
VPREB3-201ENST00000248948 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
VPREB3-201ENST00000248948 CCDC17Q96LX7 622 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
VPREB3-201ENST00000248948 FEZ1Q99689 392 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 KIAA1683Q9H0B3 1180 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
VPREB3-201ENST00000248948 RLFQ13129 1914 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 ZMYM6O95789 1325 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 CYP2D7A0A087X1C5 515 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
VPREB3-201ENST00000248948 CYP2C8P10632 490 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 BCRP11274 1271 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 USP14P54578 494 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 KIF22Q14807 665 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms