RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 MYO1BO43795 1136 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 KRT14P02533 472 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 KRT9P35527 623 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 B4GALNT4Q76KP1 1039 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 MICU3Q86XE3 530 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 SAR1BQ9Y6B6 198 aa20.62■□□□□ 0.89
PTPN12-201ENST00000248594 MEFVO15553 781 aaPredicted RBP20.61■□□□□ 0.89
PTPN12-201ENST00000248594 EZRP15311 586 aaKnown RBP20.61■□□□□ 0.89
PTPN12-201ENST00000248594 CCDC70Q6NSX1 233 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 HDAC7Q8WUI4 952 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 TUBE1Q9UJT0 475 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 E7EVH7 732 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 SLC39A14Q15043 492 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 POSTNQ15063 836 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 TTC39AQ5SRH9 613 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 TAB2Q9NYJ8 693 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 DBNLQ9UJU6 430 aaKnown RBP20.61■□□□□ 0.89
PTPN12-201ENST00000248594 ROBO2Q9HCK4 1378 aa20.61■□□□□ 0.89
PTPN12-201ENST00000248594 CALRP27797 417 aaKnown RBP20.6■□□□□ 0.89
PTPN12-201ENST00000248594 LTKP29376 864 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 CXCR5P32302 372 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 KIF23Q02241 960 aaPredicted RBP20.6■□□□□ 0.89
PTPN12-201ENST00000248594 PLCD4Q9BRC7 762 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 BAIAP2L1Q9UHR4 511 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 TTF2Q9UNY4 1162 aaKnown RBP20.6■□□□□ 0.89
PTPN12-201ENST00000248594 ZBTB12Q9Y330 459 aaPredicted RBP20.6■□□□□ 0.89
PTPN12-201ENST00000248594 TNRQ92752 1358 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 MYBL1P10243 752 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 CCNHP51946 323 aaPredicted RBP20.6■□□□□ 0.89
PTPN12-201ENST00000248594 IFT81Q8WYA0 676 aa20.6■□□□□ 0.89
PTPN12-201ENST00000248594 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 TEX11Q8IYF3 940 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 JAKMIP2Q96AA8 810 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 A0A1B0GUA9 196 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 IRF6O14896 467 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 ERVK-24P63145 666 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 TRIM29Q14134 588 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 ALKQ9UM73 1620 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 PRC1O43663 620 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 MFAP3LO75121 409 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 MAP2K1Q02750 393 aaPredicted RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 CCDC121Q6ZUS5 278 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 THOC1Q96FV9 657 aaKnown RBP20.59■□□□□ 0.89
PTPN12-201ENST00000248594 HAUS2Q9NVX0 235 aa20.59■□□□□ 0.89
PTPN12-201ENST00000248594 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
PTPN12-201ENST00000248594 HSF2BPO75031 334 aa20.58■□□□□ 0.89
PTPN12-201ENST00000248594 GCFC2P16383 781 aaKnown RBP20.58■□□□□ 0.89
PTPN12-201ENST00000248594 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
PTPN12-201ENST00000248594 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.89
PTPN12-201ENST00000248594 SLC40A1Q9NP59 571 aa20.58■□□□□ 0.89
PTPN12-201ENST00000248594 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
PTPN12-201ENST00000248594 GUCY2FP51841 1108 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 HDLBPQ00341 1268 aaKnown RBP20.58■□□□□ 0.88
PTPN12-201ENST00000248594 FKBP4Q02790 459 aaKnown RBP eCLIP20.58■□□□□ 0.88
PTPN12-201ENST00000248594 KIF9Q9HAQ2 790 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 MCM8Q9UJA3 840 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 RNF225M0QZC1 329 aaPredicted RBP20.58■□□□□ 0.88
PTPN12-201ENST00000248594 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.88
PTPN12-201ENST00000248594 TSR1Q2NL82 804 aaKnown RBP20.58■□□□□ 0.88
PTPN12-201ENST00000248594 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 CCDC13Q8IYE1 715 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 FAXDC2Q96IV6 333 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 EHD2Q9NZN4 543 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 WWC3Q9ULE0 1092 aa20.58■□□□□ 0.88
PTPN12-201ENST00000248594 IDEP14735 1019 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 SNCBQ16143 134 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 ARMC3Q5W041 872 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 USP49Q70CQ1 688 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 BRAPQ7Z569 592 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
PTPN12-201ENST00000248594 RIPOR2Q9Y4F9 1068 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 SBNO1A3KN83 1393 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 OPLAHO14841 1288 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 NR1I3Q14994 352 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 KRT40Q6A162 431 aa20.57■□□□□ 0.88
PTPN12-201ENST00000248594 DDX20Q9UHI6 824 aaKnown RBP20.57■□□□□ 0.88
PTPN12-201ENST00000248594 AARSP49588 968 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■■ 32.8
PTPN12-201ENST00000248594 NNTQ13423 1086 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 MICALCLQ6ZW33 695 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 MAATS1Q7Z4T9 603 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
PTPN12-201ENST00000248594 FMNL3Q8IVF7 1028 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 PANX2Q96RD6 677 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 DMGDHQ9UI17 866 aaKnown RBP20.56■□□□□ 0.88
PTPN12-201ENST00000248594 DACH1Q9UI36 760 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 ESYT3A0FGR9 886 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 ARHGAP25P42331 645 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 RASGRP2Q7LDG7 609 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 SPDL1Q96EA4 605 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 EME2A4GXA9 379 aaPredicted RBP20.56■□□□□ 0.88
PTPN12-201ENST00000248594 GRM8O00222 908 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 GYPCP04921 128 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms