RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TOP1P11387 765 aaKnown RBP29.29■■■□□ 2.28
RAB40C-201ENST00000248139 SEC23AQ15436 765 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 KMT5BQ4FZB7 885 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 RILPL1Q5EBL4 403 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 V9GY48 417 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-201ENST00000248139 VSTM4Q8IW00 320 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 NFE2L3Q9Y4A8 694 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 NHSL1Q5SYE7 1610 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 A0A087X0B3 334 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 NMT2O60551 498 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 PARP10Q53GL7 1025 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 COL1A1P02452 1464 aaPredicted RBP29.28■■■□□ 2.28
RAB40C-201ENST00000248139 AFMP43652 599 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 DHX58Q96C10 678 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 RNF41Q9H4P4 317 aaPredicted RBP29.28■■■□□ 2.28
RAB40C-201ENST00000248139 SAMSN1Q9NSI8 373 aaKnown RBP29.28■■■□□ 2.28
RAB40C-201ENST00000248139 DNAI1Q9UI46 699 aa29.28■■■□□ 2.28
RAB40C-201ENST00000248139 SYCP1Q15431 976 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 ESR2Q92731 530 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 RIOK1Q9BRS2 568 aaKnown RBP29.27■■■□□ 2.28
RAB40C-201ENST00000248139 KCND1Q9NSA2 647 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 ARAP2Q8WZ64 1704 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 MYH2Q9UKX2 1941 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 FANCGO15287 622 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 CDK11BP21127 795 aaKnown RBP29.27■■■□□ 2.28
RAB40C-201ENST00000248139 PKN1Q16512 942 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 RGS22Q8NE09 1264 aa29.27■■■□□ 2.28
RAB40C-201ENST00000248139 SLU7O95391 586 aaKnown RBP29.26■■■□□ 2.27
RAB40C-201ENST00000248139 ADKP55263 362 aaKnown RBP29.26■■■□□ 2.27
RAB40C-201ENST00000248139 STAMQ92783 540 aa29.26■■■□□ 2.27
RAB40C-201ENST00000248139 SMARCE1Q969G3 411 aa29.26■■■□□ 2.27
RAB40C-201ENST00000248139 CCDC196A0A1B0GTZ2 297 aa29.26■■■□□ 2.27
RAB40C-201ENST00000248139 PSDA5PKW4 1024 aaPredicted RBP29.26■■■□□ 2.27
RAB40C-201ENST00000248139 COBLO75128 1261 aa29.26■■■□□ 2.27
RAB40C-201ENST00000248139 ERCC6LQ2NKX8 1250 aa29.26■■■□□ 2.27
RAB40C-201ENST00000248139 CGNQ9P2M7 1197 aaKnown RBP29.26■■■□□ 2.27
RAB40C-201ENST00000248139 BAZ2AQ9UIF9 1905 aaKnown RBP29.25■■■□□ 2.27
RAB40C-201ENST00000248139 AKAP17AQ02040 695 aaKnown RBP29.25■■■□□ 2.27
RAB40C-201ENST00000248139 CELF1Q92879 486 aaKnown RBP29.25■■■□□ 2.27
RAB40C-201ENST00000248139 KLHL10Q6JEL2 608 aa29.25■■■□□ 2.27
RAB40C-201ENST00000248139 FBXO38Q6PIJ6 1188 aa29.25■■■□□ 2.27
RAB40C-201ENST00000248139 ZSCAN10Q96SZ4 725 aaPredicted RBP29.25■■■□□ 2.27
RAB40C-201ENST00000248139 PRDM4Q9UKN5 801 aa29.25■■■□□ 2.27
RAB40C-201ENST00000248139 SRPRBQ9Y5M8 271 aaKnown RBP29.25■■■□□ 2.27
RAB40C-201ENST00000248139 CBFA2T2O43439 604 aa29.24■■■□□ 2.27
RAB40C-201ENST00000248139 ACTN4O43707 911 aaKnown RBP29.24■■■□□ 2.27
RAB40C-201ENST00000248139 STX17P56962 302 aa29.24■■■□□ 2.27
RAB40C-201ENST00000248139 ANKRD18AQ8IVF6 992 aa29.24■■■□□ 2.27
RAB40C-201ENST00000248139 TMTC2Q8N394 836 aa29.24■■■□□ 2.27
RAB40C-201ENST00000248139 ZHX1Q9UKY1 873 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-201ENST00000248139 VEGFAP15692 232 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-201ENST00000248139 IFIT1BQ5T764 474 aaKnown RBP29.24■■■□□ 2.27
RAB40C-201ENST00000248139 SMYD4Q8IYR2 804 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-201ENST00000248139 FAM47AQ5JRC9 791 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 ERO1AQ96HE7 468 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 TFCP2L1Q9NZI6 479 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 KDM4FA0A1W2PPD8 638 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 USP17L12C9JPN9 530 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 USP17L21D6R901 530 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 ADAMTS3O15072 1205 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 NRDCO43847 1150 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 ZNF174Q15697 407 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 PKNOX2Q96KN3 472 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 CDC5LQ99459 802 aaKnown RBP29.23■■■□□ 2.27
RAB40C-201ENST00000248139 TIAM2Q8IVF5 1701 aa29.23■■■□□ 2.27
RAB40C-201ENST00000248139 NID2Q14112 1375 aa29.22■■■□□ 2.27
RAB40C-201ENST00000248139 NUTM2BA6NNL0 878 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-201ENST00000248139 NUTM2EB1AL46 878 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-201ENST00000248139 NUTM2AQ8IVF1 878 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-201ENST00000248139 FAM84BQ96KN1 310 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-201ENST00000248139 BCORQ6W2J9 1755 aa29.22■■■□□ 2.27
RAB40C-201ENST00000248139 SLC51AQ86UW1 340 aa29.22■■■□□ 2.27
RAB40C-201ENST00000248139 MINPP1Q9UNW1 487 aa29.22■■■□□ 2.27
RAB40C-201ENST00000248139 SARSP49591 514 aaKnown RBP29.21■■■□□ 2.27
RAB40C-201ENST00000248139 MORC3Q14149 939 aa29.21■■■□□ 2.27
RAB40C-201ENST00000248139 GTF2E1P29083 439 aaPredicted RBP29.21■■■□□ 2.27
RAB40C-201ENST00000248139 FUT2Q10981 343 aa29.21■■■□□ 2.27
RAB40C-201ENST00000248139 BCL9LQ86UU0 1499 aa29.21■■■□□ 2.27
RAB40C-201ENST00000248139 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
RAB40C-201ENST00000248139 CYP2D6P10635 497 aa29.2■■■□□ 2.27
RAB40C-201ENST00000248139 TMEM139Q8IV31 216 aa29.2■■■□□ 2.27
RAB40C-201ENST00000248139 AATFQ9NY61 560 aaKnown RBP eCLIP29.2■■■□□ 2.27
RAB40C-201ENST00000248139 HOOK1Q9UJC3 728 aaKnown RBP29.2■■■□□ 2.27
RAB40C-201ENST00000248139 ZNF804BA4D1E1 1349 aa29.2■■■□□ 2.27
RAB40C-201ENST00000248139 TRIM75PA6NK02 468 aa29.2■■■□□ 2.26
RAB40C-201ENST00000248139 CTR9Q6PD62 1173 aa29.2■■■□□ 2.26
RAB40C-201ENST00000248139 TRIM65Q6PJ69 517 aa29.2■■■□□ 2.26
RAB40C-201ENST00000248139 REXO1L1PQ8IX06 675 aa29.2■■■□□ 2.26
RAB40C-201ENST00000248139 RNF26Q9BY78 433 aaPredicted RBP29.2■■■□□ 2.26
RAB40C-201ENST00000248139 ETF1P62495 437 aaKnown RBP29.19■■■□□ 2.26
RAB40C-201ENST00000248139 SPATA31A1Q5TZJ5 1347 aa29.19■■■□□ 2.26
RAB40C-201ENST00000248139 CATIPQ7Z7H3 387 aa29.19■■■□□ 2.26
RAB40C-201ENST00000248139 SYMPKQ92797 1274 aaKnown RBP29.19■■■□□ 2.26
RAB40C-201ENST00000248139 KIF2AO00139 706 aaPredicted RBP29.18■■■□□ 2.26
RAB40C-201ENST00000248139 CD44P16070 742 aaKnown RBP29.18■■■□□ 2.26
RAB40C-201ENST00000248139 CAVIN4Q5BKX8 364 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 L2HGDHQ9H9P8 463 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 GNL3LQ9NVN8 582 aaKnown RBP29.18■■■□□ 2.26
RAB40C-201ENST00000248139 DDX41Q9UJV9 622 aaKnown RBP29.18■■■□□ 2.26
RAB40C-201ENST00000248139 COL14A1Q05707 1796 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms