RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PLIN2Q99541 437 aa14.38□□□□□ -0.11
RAB3IP-201ENST00000247833 TRPM3Q9HCF6 1732 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-201ENST00000247833 PHRF1Q9P1Y6 1649 aaKnown RBP14.38□□□□□ -0.11
RAB3IP-201ENST00000247833 PSDA5PKW4 1024 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 ZSCAN20P17040 1043 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 VSTM4Q8IW00 320 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 EPC1Q9H2F5 836 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 TUBE1Q9UJT0 475 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 SOS2Q07890 1332 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 LOC102724428A0A0B4J2F2 783 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 SIK1P57059 783 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 ABCC12Q96J65 1359 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 CDC25AP30304 524 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 TOB1P50616 345 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 PPP2R2CQ9Y2T4 447 aa14.37□□□□□ -0.11
RAB3IP-201ENST00000247833 SIPA1L3O60292 1781 aaPredicted RBP14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 ERVV-1B6SEH8 477 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 PTPREP23469 700 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 SPECC1LQ69YQ0 1117 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 MLKLQ8NB16 471 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 NMT2O60551 498 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 DMTNQ08495 405 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 KANK3Q6NY19 840 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 ZNF34Q8IZ26 560 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 ARHGAP6O43182 974 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 ANKRD20A12PQ8NF67 263 aa14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 FOXP1Q9H334 677 aaPredicted RBP14.36□□□□□ -0.11
RAB3IP-201ENST00000247833 N4BP3O15049 544 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 ALX1Q15699 326 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 PCMTD1Q96MG8 357 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 ST7Q9NRC1 585 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 FBXO2Q9UK22 296 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 IGSF22Q8N9C0 903 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 CTNND2Q9UQB3 1225 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 RTL9Q8NET4 1388 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 FGFR2P21802 821 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 PARP10Q53GL7 1025 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 DZIP1Q86YF9 867 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 EEF2KMTQ96G04 330 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 VPS16Q9H269 839 aa14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-201ENST00000247833 BMP6P22004 513 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 TTC38Q5R3I4 469 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 ENAHQ8N8S7 591 aaPredicted RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 ZNF512BQ96KM6 892 aaPredicted RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 SYNRGQ9UMZ2 1314 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 USP5P45974 858 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 GTPBP4Q9BZE4 634 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 PUF60Q9UHX1 559 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 DDX41Q9UJV9 622 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 TXLNAP40222 546 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 PTGDRQ13258 359 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 MTF1Q14872 753 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 SYCP1Q15431 976 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 DCCP43146 1447 aa14.34□□□□□ -0.11
RAB3IP-201ENST00000247833 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.11
RAB3IP-201ENST00000247833 TEX33O43247 280 aa14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 IRX2Q9BZI1 471 aaPredicted RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 SRPRBQ9Y5M8 271 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 AKR1B15C9JRZ8 316 aaPredicted RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 EIF5P55010 431 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-201ENST00000247833 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 CYP2D6P10635 497 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 EARS2Q5JPH6 523 aaKnown RBP14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 KCNQ2O43526 872 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 CCDC175P0C221 793 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 NBPF5PQ86XG9 351 aaPredicted RBP14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 RNF26Q9BY78 433 aaPredicted RBP14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 KAT14Q9H8E8 782 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 LAMA4Q16363 1823 aa14.32□□□□□ -0.12
RAB3IP-201ENST00000247833 KIF5CO60282 957 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 PLCD1P51178 756 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 CLCN6P51797 869 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms