RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FOXN1O15353 648 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 UBE4AQ14139 1066 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 POSTNQ15063 836 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 NT5DC1Q5TFE4 455 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 SRPRBQ9Y5M8 271 aaKnown RBP24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 MORC2Q9Y6X9 1032 aaPredicted RBP24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 VSTM4Q8IW00 320 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 NOL10Q9BSC4 688 aaKnown RBP24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 MAN1B1Q9UKM7 699 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 DLEC1Q9Y238 1755 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 GYG1P46976 350 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 PDE4BQ07343 736 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 NAA30Q147X3 362 aaPredicted RBP24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 ANKRD18AQ8IVF6 992 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 OXER1Q8TDS5 423 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 FANCLQ9NW38 375 aa24.81■■□□□ 1.56
SH2D3A-201ENST00000245908 MYH2Q9UKX2 1941 aa24.8■■□□□ 1.56
SH2D3A-201ENST00000245908 CFAP100Q494V2 611 aa24.8■■□□□ 1.56
SH2D3A-201ENST00000245908 FEZ1Q99689 392 aa24.8■■□□□ 1.56
SH2D3A-201ENST00000245908 CGNQ9P2M7 1197 aaKnown RBP24.8■■□□□ 1.56
SH2D3A-201ENST00000245908 POLR2DO15514 142 aaKnown RBP24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 SARSP49591 514 aaKnown RBP24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 TAF3Q5VWG9 929 aa24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 CLEC4GQ6UXB4 293 aa24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 SERTAD1Q9UHV2 236 aa24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 BAZ2AQ9UIF9 1905 aaKnown RBP24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 TUBB4AP04350 444 aa24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 SF3B3Q15393 1217 aaKnown RBP24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 BRIP1Q9BX63 1249 aa24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 ZNF215Q9UL58 517 aaPredicted RBP24.79■■□□□ 1.56
SH2D3A-201ENST00000245908 ENAHQ8N8S7 591 aaPredicted RBP24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 SHISA4Q96DD7 197 aa24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 ZSCAN10Q96SZ4 725 aaPredicted RBP24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 TMX1Q9H3N1 280 aa24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 BSDC1Q9NW68 430 aaPredicted RBP24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 MLKLQ8NB16 471 aa24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 ERO1AQ96HE7 468 aa24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 TAF1P21675 1872 aa24.78■■□□□ 1.56
SH2D3A-201ENST00000245908 CCP110O43303 1012 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 PRR29P0C7W0 189 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 AKAP17AQ02040 695 aaKnown RBP24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 FUT2Q10981 343 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 MORC3Q14149 939 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 ERFEQ4G0M1 354 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 KANK3Q6NY19 840 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 TRIML1Q8N9V2 468 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 CABP5Q9NP86 173 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 DACH1Q9UI36 760 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 ZNF831Q5JPB2 1677 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 SMIM22K7EJ46 135 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 ACTN4O43707 911 aaKnown RBP24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 XBP1P17861 261 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 PKN1Q16512 942 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 C3orf67Q6ZVT6 689 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 SMARCC1Q92922 1105 aaPredicted RBP24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 SMARCE1Q969G3 411 aa24.77■■□□□ 1.56
SH2D3A-201ENST00000245908 PRPF3O43395 683 aaKnown RBP24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 FGRP09769 529 aa24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 PCP11498 1178 aaKnown RBP24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 CAVIN4Q5BKX8 364 aa24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 PHF20Q9BVI0 1012 aa24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 INTS13Q9NVM9 706 aa24.76■■□□□ 1.55
SH2D3A-201ENST00000245908 TMEM232C9JQI7 657 aa24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 SLU7O95391 586 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 TOP1P11387 765 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 DYNLL1P63167 89 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 CSRNP2Q9H175 543 aa24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 L2HGDHQ9H9P8 463 aa24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 WTIPA6NIX2 430 aaPredicted RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 ENOX1Q8TC92 643 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 RBM28Q9NW13 759 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-201ENST00000245908 TRIM75PA6NK02 468 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 SPDYE4A6NLX3 237 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 ZNF18P17022 549 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 KRT2P35908 639 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 IFIT1BQ5T764 474 aaKnown RBP24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 CATIPQ7Z7H3 387 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 SPATA20Q8TB22 786 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 ZNF384Q8TF68 577 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 AATFQ9NY61 560 aaKnown RBP eCLIP24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 VPS54Q9P1Q0 977 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 MINPP1Q9UNW1 487 aa24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 FMR1Q06787 632 aaKnown RBP eCLIP24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 FAM84BQ96KN1 310 aaPredicted RBP24.74■■□□□ 1.55
SH2D3A-201ENST00000245908 ATP2B1P20020 1258 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 SYT10Q6XYQ8 523 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 CYP2D7A0A087X1C5 515 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 ADAMTS2O95450 1211 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 CALM1P0DP23 149 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 CALM2P0DP24 149 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 CALM3P0DP25 149 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 TBX2Q13207 712 aaPredicted RBP24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 USP49Q70CQ1 688 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 FCHSD1Q86WN1 690 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 IQCA1Q86XH1 822 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 NFE2L3Q9Y4A8 694 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 SPATA31A5Q5VU36 1347 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 SPATA31A7Q8IWB4 1347 aa24.73■■□□□ 1.55
SH2D3A-201ENST00000245908 FAM205CA6NFA0 338 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 TROAPQ12815 778 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms