RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MRPS27Q92552 414 aaKnown RBP21.41■■□□□ 1.02
HOXC11-201ENST00000243082 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
HOXC11-201ENST00000243082 ROBO3Q96MS0 1386 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 DDAH1O94760 285 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 CALM1P0DP23 149 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 CALM2P0DP24 149 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 CALM3P0DP25 149 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 FMR1NBQ8N0W7 255 aaPredicted RBP21.4■■□□□ 1.02
HOXC11-201ENST00000243082 DYNLL2Q96FJ2 89 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 MAP3K14Q99558 947 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 RBM28Q9NW13 759 aaKnown RBP21.4■■□□□ 1.02
HOXC11-201ENST00000243082 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
HOXC11-201ENST00000243082 TSPY2A6NKD2 308 aa21.39■■□□□ 1.02
HOXC11-201ENST00000243082 BTBD18B2RXH4 712 aa21.39■■□□□ 1.02
HOXC11-201ENST00000243082 PDE6BP35913 854 aa21.39■■□□□ 1.02
HOXC11-201ENST00000243082 AXDND1Q5T1B0 1012 aaPredicted RBP21.39■■□□□ 1.02
HOXC11-201ENST00000243082 OLFM4Q6UX06 510 aa21.39■■□□□ 1.02
HOXC11-201ENST00000243082 CERS3Q8IU89 383 aa21.39■■□□□ 1.02
HOXC11-201ENST00000243082 CTAGE5O15320 804 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 PLEKHA8P1O95397 391 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 PTPAQ15257 358 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 PKN1Q16512 942 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 HS1BP3Q53T59 392 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 RCSD1Q6JBY9 416 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 NOSTRINQ8IVI9 506 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 USP25Q9UHP3 1055 aa21.39■■□□□ 1.01
HOXC11-201ENST00000243082 A0A1B0GVL5 298 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 RIMBP2O15034 1052 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 PRPF3O43395 683 aaKnown RBP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 ALDH1B1P30837 517 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 NT5C2P49902 561 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 MAPKAPK5Q8IW41 473 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 DIS3L2Q8IYB7 885 aaKnown RBP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 FAM200AQ8TCP9 573 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 COA1Q9GZY4 146 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 KINO60870 393 aaKnown RBP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 PLCD1P51178 756 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 NDUFA8P51970 172 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 TFAP4Q01664 338 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 SAFBQ15424 915 aaKnown RBP eCLIP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 SASS6Q6UVJ0 657 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 MPNDQ8N594 471 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 SHISA4Q96DD7 197 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 FOXP1Q9H334 677 aaPredicted RBP21.38■■□□□ 1.01
HOXC11-201ENST00000243082 GAKO14976 1311 aa21.38■■□□□ 1.01
HOXC11-201ENST00000243082 RHBDL3P58872 404 aa21.37■■□□□ 1.01
HOXC11-201ENST00000243082 GTF2IP78347 998 aa21.37■■□□□ 1.01
HOXC11-201ENST00000243082 ANO6Q4KMQ2 910 aa21.37■■□□□ 1.01
HOXC11-201ENST00000243082 TMTC3Q6ZXV5 915 aa21.37■■□□□ 1.01
HOXC11-201ENST00000243082 IL17RBQ9NRM6 502 aa21.37■■□□□ 1.01
HOXC11-201ENST00000243082 TNS1Q9HBL0 1735 aaKnown RBP21.37■■□□□ 1.01
HOXC11-201ENST00000243082 PPP6R2O75170 966 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 MARCKSP29966 332 aaPredicted RBP21.36■■□□□ 1.01
HOXC11-201ENST00000243082 AMOTL1Q8IY63 956 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 MASTLQ96GX5 879 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 COL11A2P13942 1736 aaPredicted RBP21.36■■□□□ 1.01
HOXC11-201ENST00000243082 NAV1Q8NEY1 1877 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 AKAP17AQ02040 695 aaKnown RBP21.36■■□□□ 1.01
HOXC11-201ENST00000243082 SLF2Q8IX21 1173 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 SAP30BPQ9UHR5 308 aaKnown RBP21.36■■□□□ 1.01
HOXC11-201ENST00000243082 V9GY48 417 aaPredicted RBP21.36■■□□□ 1.01
HOXC11-201ENST00000243082 CDK5RAP2Q96SN8 1893 aa21.36■■□□□ 1.01
HOXC11-201ENST00000243082 PLCG2P16885 1265 aa21.35■■□□□ 1.01
HOXC11-201ENST00000243082 CMA1P23946 247 aa21.35■■□□□ 1.01
HOXC11-201ENST00000243082 TOB1P50616 345 aaPredicted RBP21.35■■□□□ 1.01
HOXC11-201ENST00000243082 DGKHQ86XP1 1220 aa21.35■■□□□ 1.01
HOXC11-201ENST00000243082 SRBD1Q8N5C6 995 aaKnown RBP21.35■■□□□ 1.01
HOXC11-201ENST00000243082 ANKS1AQ92625 1134 aa21.35■■□□□ 1.01
HOXC11-201ENST00000243082 ZC3H12CQ9C0D7 883 aaKnown RBP21.35■■□□□ 1.01
HOXC11-201ENST00000243082 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
HOXC11-201ENST00000243082 AP5Z1O43299 807 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 ADCY5O95622 1261 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 NR5A1Q13285 461 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
HOXC11-201ENST00000243082 CTCFLQ8NI51 663 aaPredicted RBP21.34■■□□□ 1.01
HOXC11-201ENST00000243082 OXER1Q8TDS5 423 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.34■■□□□ 1.01
HOXC11-201ENST00000243082 MYH6P13533 1939 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 hCG_1642624A0A1W2PR95 340 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 SLC44A5Q8NCS7 719 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 CBX8Q9HC52 389 aa21.34■■□□□ 1.01
HOXC11-201ENST00000243082 FLT1P17948 1338 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 CNTNAP5Q8WYK1 1306 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 ZSCAN30Q86W11 494 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 PHF20Q9BVI0 1012 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 TCP11L1Q9NUJ3 509 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 VPS54Q9P1Q0 977 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 DAGLAQ9Y4D2 1042 aa21.33■■□□□ 1.01
HOXC11-201ENST00000243082 LUZP1Q86V48 1076 aa21.33■■□□□ 1
HOXC11-201ENST00000243082 CERS5Q8N5B7 392 aa21.33■■□□□ 1
HOXC11-201ENST00000243082 DNAJC25Q9H1X3 360 aa21.33■■□□□ 1
HOXC11-201ENST00000243082 SUGT1Q9Y2Z0 365 aa21.33■■□□□ 1
HOXC11-201ENST00000243082 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
HOXC11-201ENST00000243082 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
HOXC11-201ENST00000243082 USP17L3A6NCW0 530 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms